RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SNX20Q7Z614 316 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 FJX1Q86VR8 437 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 KATNAL2Q8IYT4 538 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 RCOR2Q8IZ40 523 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 IQCKQ8N0W5 287 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 OR4N4Q8N0Y3 316 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 DNAJC22Q8N4W6 341 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 OR52K1Q8NGK4 314 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 C5orf34Q96MH7 638 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNHIT6Q9NWK9 470 aaKnown RBP6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 HACD3Q9P035 362 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 GPN3Q9UHW5 284 aaPredicted RBP6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 CDC23Q9UJX2 597 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 TRIM33Q9UPN9 1127 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 PCDHGB7Q9Y5F8 929 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 PCDHA13Q9Y5I0 950 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 PCNX1Q96RV3 2341 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ANKRD12Q6UB98 2062 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ITPR3Q14573 2671 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 F8P00451 2351 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 C5orf60A6NFR6 353 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 AGAP14A8MT82 685 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 M0R082 166 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 IFRD1O00458 451 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 E2F3O00716 465 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 SOCS6O14544 535 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ZSCAN9O15535 394 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 PSTPIP1O43586 416 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 CTSVO60911 334 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 KCNJ13O60928 360 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ANXA9O76027 345 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 EIF2S1P05198 315 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ACADLP28330 430 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TNFRSF8P28908 595 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 CCR7P32248 378 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 SLC1A1P43005 524 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 BDKRB1P46663 353 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 EFNA3P52797 238 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 CRADDP78560 199 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 DCDP81605 110 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 PMP22Q01453 160 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TBX2Q13207 712 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 CYP2A13Q16696 494 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 VWA5B1Q5TIE3 1220 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 FCRL6Q6DN72 434 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 FRMPD2BQ6IN97 320 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 SARM1Q6SZW1 724 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 KIRREL2Q6UWL6 708 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 C20orf204Q6ZNR8 217 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 HOOK3Q86VS8 718 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 KCNMB4Q86W47 210 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 RAB43Q86YS6 212 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 MCATQ8IVS2 390 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 RHOT2Q8IXI1 618 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 GPR135Q8IZ08 494 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TMEM102Q8N9M5 508 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TC2NQ8N9U0 490 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 CLEC1AQ8NC01 280 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ACRBPQ8NEB7 543 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 OR2Y1Q8NGV0 311 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF417Q8TAU3 575 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 DNAJB14Q8TBM8 379 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 UBE2Q2Q8WVN8 375 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 CDKN2AIPNLQ96HQ2 116 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 THOC3Q96J01 351 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 LINC00615Q96LM1 132 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 MAGEB10Q96LZ2 347 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 SPATA13Q96N96 652 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 FRMD6Q96NE9 622 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 LRFN5Q96NI6 719 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF587Q96SQ5 575 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TCF12Q99081 682 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 MIPEPQ99797 713 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 OSBPL8Q9BZF1 889 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TFB2MQ9H5Q4 396 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 ABCF3Q9NUQ8 709 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 EURLQ9NYK6 297 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 MARCH4Q9P2E8 410 aaPredicted RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 TRHDEQ9UKU6 1024 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 SLC5A6Q9Y289 635 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 REXO2Q9Y3B8 237 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 HS3ST3B1Q9Y662 390 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 NFS1Q9Y697 457 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 MTORP42345 2549 aa6.56□□□□□ -1.36
PRPF40B-214ENST00000551320 PKDREJQ9NTG1 2253 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 ZFHX3Q15911 3703 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 IGLV3-16A0A075B6K0 115 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 TRBV5-4A0A0C4DH59 114 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 A0A0J9YY10 115 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 SLC5A10A0PJK1 596 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 AKR1B15C9JRZ8 316 aaPredicted RBP6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 GOLGA8KD6RF30 607 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 GOLGA8TH3BQL2 631 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 APOC4-APOC2K7ER74 178 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 PEX12O00623 359 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 PJA2O43164 708 aa6.55□□□□□ -1.36
PRPF40B-214ENST00000551320 CRTAMO95727 393 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms