RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 AQP7P3A6NL99 342 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 MEI4A8MW99 385 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TMCO5BA8MYB1 307 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 RASA4BC9J798 803 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 F8W8V4 182 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PES1O00541 588 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TRIM38O00635 465 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TRAFD1O14545 582 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 VILLO15195 856 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 RASA4O43374 803 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 MFSD11O43934 449 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SYNCRIPO60506 623 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PRAMEF11O60813 436 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 RNASEH2AO75792 299 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TMCC1O94876 653 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PIGNO95427 931 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CYP1A2P05177 515 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CALB1P05937 261 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ATP5BP06576 529 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 KRT3P12035 628 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 GZMAP12544 262 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CEACAM1P13688 526 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ADRB3P13945 408 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 FERP16591 822 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ABCB4P21439 1286 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TNFAIP3P21580 790 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SDC4P31431 198 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CHRNA3P32297 505 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 NSFP46459 744 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PDX1P52945 283 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CLDN2P57739 230 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 KCNAB1Q14722 419 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 AWAT1Q58HT5 328 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 DENND2CQ68D51 928 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 DNAJC24Q6P3W2 148 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF813Q6ZN06 617 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 GATAD2AQ86YP4 633 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TMEM139Q8IV31 216 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 WDR75Q8IWA0 830 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SFTPA2Q8IWL1 248 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SLC25A45Q8N413 288 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 HDDC3Q8N4P3 179 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PQLC3Q8N755 202 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 DENND1AQ8TEH3 1009 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 UCMAQ8WVF2 138 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 GOLGA1Q92805 767 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 KLK6Q92876 244 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ISG20Q96AZ6 181 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 FAF2Q96CS3 445 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ECHDC3Q96DC8 303 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TBC1D31Q96DN5 1066 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CELF6Q96J87 481 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CHP1Q99653 195 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 DDX50Q9BQ39 737 aaKnown RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SCNM1Q9BWG6 230 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TM6SF2Q9BZW4 377 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SLC39A8Q9C0K1 460 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SPRTNQ9H040 489 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 BTBD1Q9H0C5 482 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 THAP2Q9H0W7 228 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 TCEAL2Q9H3H9 227 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 FAM83DQ9H4H8 585 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 GAREM1Q9H706 876 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 SGK2Q9HBY8 427 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 IFNKQ9P0W0 207 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 RIMKLBQ9ULI2 386 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 STAP1Q9ULZ2 295 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 CAPN11Q9UMQ6 739 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 PCYT1BQ9Y5K3 369 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-214ENST00000550893 UNC13CQ8NB66 2214 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 FLNCQ14315 2725 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 NBPF19A0A087WUL8 3843 aa4.86□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 FCHO1O14526 889 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SLC7A4O43246 635 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 KDELR3O43731 214 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 TMPRSS11DO60235 418 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 INMTO95050 263 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 GSRP00390 522 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SOD1P00441 154 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 F9P00740 461 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 IL1BP01584 269 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 MT-ND5P03915 603 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 DNTTP04053 509 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ERCC2P18074 760 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 LHCGRP22888 699 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ATP5F1P24539 256 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 OXTRP30559 389 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 OR1E1P30953 314 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 MAT2AP31153 395 aaKnown RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CASP14P31944 242 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 MMP12P39900 470 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 MMP13P45452 471 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 RXRGP48443 463 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 MARCKSL1P49006 195 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ACADVLP49748 655 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 PFN3P60673 137 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SEMG2Q02383 582 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms