RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CCNFP41002 786 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 GCGRP47871 477 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 ARL4CP56559 192 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 SNRPNP63162 240 aaKnown RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 NFATC3Q12968 1075 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 CHAF1BQ13112 559 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 TSTA3Q13630 321 aaPredicted RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 ZXDCQ2QGD7 858 aaPredicted RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 CPZQ66K79 652 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 DUPD1Q68J44 220 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 CYB5D1Q6P9G0 228 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 TTC23LQ6PF05 361 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 TMEM207Q6UWW9 146 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 NEK10Q6ZWH5 1172 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 LMNTD2Q8IXW0 634 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF480Q8WV37 535 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 FOPNLQ96NB1 174 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 LRFN5Q96NI6 719 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 RUNDC3BQ96NL0 473 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 GBP5Q96PP8 586 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 ERP44Q9BS26 406 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 TRIM55Q9BYV6 548 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 CHRNA10Q9GZZ6 450 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 CCDC68Q9H2F9 335 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 FANCEQ9HB96 536 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 SYTL2Q9HCH5 934 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 PPANQ9NQ55 473 aaKnown RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 SLC22A11Q9NSA0 550 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 RNF14Q9UBS8 474 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 PLCL2Q9UPR0 1127 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 SH2B3Q9UQQ2 575 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 FARSAQ9Y285 508 aaKnown RBP9.39□□□□□ -0.91
HDAC7-229ENST00000549883 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
HDAC7-229ENST00000549883 TLN1Q9Y490 2541 aaKnown RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 A0A0J9YVX5 310 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 CXorf49A8MYA2 514 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 C21orf140B9A014 251 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 E7ENX8 843 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 KDM1AO60341 852 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 VPS26AO75436 327 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 TSPAN12O95859 305 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 STATHP02808 62 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 KLK3P07288 261 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 IMPA1P29218 277 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 SSTR1P30872 391 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 GMPRP36959 345 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 CCR10P46092 362 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 PNLIPRP1P54315 467 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 VSX2P58304 361 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 SLC7A5Q01650 507 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 TAP2Q03519 686 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 KCNAB2Q13303 367 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF460Q14592 562 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 PHKG1Q16816 387 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 TTLL9Q3SXZ7 439 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 HECTD2Q5U5R9 776 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 FBXO42Q6P3S6 717 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 ZDHHC24Q6UX98 284 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 UBE2R2Q712K3 238 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 PTRH1Q86Y79 214 aaKnown RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 PLD3Q8IV08 490 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 GPR135Q8IZ08 494 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 ZBED8Q8IZ13 594 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 SHISA5Q8N114 240 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 METTL27Q8N6F8 245 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 GPATCH11Q8N954 259 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 ADAMTS17Q8TE56 1095 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 SLC22A18Q96BI1 424 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 LINGO1Q96FE5 620 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 NAT9Q9BTE0 207 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 DPH7Q9BTV6 452 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 EFHD1Q9BUP0 239 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 RAB11FIP5Q9BXF6 653 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 NLNQ9BYT8 704 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF71Q9NQZ8 489 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 IRAK4Q9NWZ3 460 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 GEMIN8Q9NWZ8 242 aaKnown RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 MOCS1Q9NZB8 636 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 SPATA7Q9P0W8 599 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 KLHL42Q9P2K6 505 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 TAC3Q9UHF0 121 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 TRMT6Q9UJA5 497 aaKnown RBP9.38□□□□□ -0.91
HDAC7-229ENST00000549883 KCND3Q9UK17 655 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 PDE10AQ9Y233 779 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 COMMD10Q9Y6G5 202 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 NUP210LQ5VU65 1888 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 CFAP46Q8IYW2 2715 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 SCN2AQ99250 2005 aa9.38□□□□□ -0.91
HDAC7-229ENST00000549883 DOCK10Q96BY6 2186 aa9.37□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF462Q96JM2 2506 aa9.37□□□□□ -0.91
HDAC7-229ENST00000549883 ESYT3A0FGR9 886 aa9.37□□□□□ -0.91
HDAC7-229ENST00000549883 OR2A25A4D2G3 310 aa9.37□□□□□ -0.91
HDAC7-229ENST00000549883 MAP3K7O43318 606 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 330.6 ms