RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 OR2A1Q8NGT9 310 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.87□□□□□ -0.35
GCN1-206ENST00000549815 PNPLA2Q96AD5 504 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 SPSB2Q99619 263 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
GCN1-206ENST00000549815 CUTCQ9NTM9 273 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 CRYL1Q9Y2S2 319 aa12.87□□□□□ -0.35
GCN1-206ENST00000549815 ZCWPW2A0A1B0GU75 182 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 ARHGEF33A8MVX0 844 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 H3BMM5 538 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 SRPX2O60687 465 aaPredicted RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 PSIP1O75475 530 aaKnown RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 IGHEP01854 428 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 F7P08709 466 aaPredicted RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 MLNP12872 115 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 PKMP14618 531 aaKnown RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 ALAS2P22557 587 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 GNLYP22749 145 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 CLCN7P51798 805 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 RAPSNQ13702 412 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 GRM7Q14831 915 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 MYBPC3Q14896 1274 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 NKG7Q16617 165 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 CYP1B1Q16678 543 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 ACSBG2Q5FVE4 666 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 NEPROQ6NW34 567 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 AGGF1Q8N302 714 aaeCLIP12.86□□□□□ -0.35
GCN1-206ENST00000549815 GALNT16Q8N428 558 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 DTWD1Q8N5C7 304 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 GSDMBQ8TAX9 411 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 MAGEC3Q8TD91 643 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 SKA2Q8WVK7 121 aaPredicted RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 NACC2Q96BF6 587 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 MS4A14Q96JA4 679 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 FOPNLQ96NB1 174 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 MIPEPQ99797 713 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 WDR54Q9H977 334 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 LUZP4Q9P127 313 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 G3BP2Q9UN86 482 aaKnown RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 MED16Q9Y2X0 877 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 RP1L1Q8IWN7 2480 aaPredicted RBP12.86□□□□□ -0.35
GCN1-206ENST00000549815 DOCK10Q96BY6 2186 aa12.86□□□□□ -0.35
GCN1-206ENST00000549815 HEATR5BQ9P2D3 2071 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 UTP20O75691 2785 aaKnown RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 LOC105369274A0A096LPK9 316 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 LOC102723532A0A0G2JNH3 316 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 OR2A25A4D2G3 310 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 AGPSO00116 658 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 MYO1CO00159 1063 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 PEX12O00623 359 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 SOCS6O14544 535 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 VPS4BO75351 444 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 CHRM3P20309 590 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 MMP11P24347 488 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 MAGEA3P43357 314 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 VSX2P58304 361 aaPredicted RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 ANKRD20A4Q4UJ75 823 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 WASHC2DQ5SRD0 308 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 FBXO42Q6P3S6 717 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 IGFL3Q6UXB1 125 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 OR4N4Q8N0Y3 316 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 RAB42Q8N4Z0 105 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 CLEC1AQ8NC01 280 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 MCUQ8NE86 351 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 OR9A1PQ8NGU1 263 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 GIMAP7Q8NHV1 300 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 MAGOHBQ96A72 148 aaKnown RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 COL26A1Q96A83 441 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 PBKQ96KB5 322 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 SERPINB12Q96P63 405 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 PSMG3-AS1Q96PY0 264 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 SELENOSQ9BQE4 189 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 SYNPO2LQ9H987 977 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 SLC6A20Q9NP91 592 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 INTS10Q9NVR2 710 aaKnown RBP12.85□□□□□ -0.35
GCN1-206ENST00000549815 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 JRKLQ9Y4A0 524 aa12.85□□□□□ -0.35
GCN1-206ENST00000549815 IGKV1-8A0A0C4DH67 115 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 A0A0J9YVX5 310 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 MAGEB16A2A368 324 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 SDR42E2A6NKP2 422 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 PFDN6O15212 129 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 PIM1P11309 404 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms