RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 INTS7Q9NVH2 962 aaKnown RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 GPR83Q9NYM4 423 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 GNPTGQ9UJJ9 305 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 CRYL1Q9Y2S2 319 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 NFS1Q9Y697 457 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 MYO18BQ8IUG5 2567 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 ZFC3H1O60293 1989 aaKnown RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 HECTD1Q9ULT8 2610 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 GOLGA8MH3BSY2 632 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 PFDN6O15212 129 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 DPM1O60762 260 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 LILRA1O75019 489 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CNOT3O75175 753 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 NIPSNAP2O75323 286 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CEACAM4O75871 244 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 C1orf105O95561 183 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 KRT14P02533 472 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 EIF2S1P05198 315 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CD63P08962 238 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 GNLYP22749 145 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 MCM3P25205 808 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ARNTP27540 789 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 PSMB5P28074 263 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 BDKRB1P46663 353 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 OR1D4P47884 311 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 UQCRFS1P47985 274 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CD97P48960 835 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ARSFP54793 590 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 VSX2P58304 361 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 YBX1P67809 324 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 SARNPP82979 210 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CDK16Q00536 496 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 TSTA3Q13630 321 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 PLEKHN1Q494U1 663 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ACSBG2Q5FVE4 666 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CTSL3PQ5NE16 218 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 WASHC2DQ5SRD0 308 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ANKRD22Q5VYY1 191 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 PAPD7Q5XG87 772 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 NEPROQ6NW34 567 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 JMJD6Q6NYC1 403 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 TTC27Q6P3X3 843 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF662Q6ZS27 426 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 SHISA6Q6ZSJ9 500 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 OVCH1Q7RTY7 1134 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 MRGPREQ86SM8 312 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 MPP5Q8N3R9 675 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 RAB42Q8N4Z0 105 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 FAM26EQ8N5C1 309 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 METTL27Q8N6F8 245 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CLEC1AQ8NC01 280 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 OR2Y1Q8NGV0 311 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 PROKR1Q8TCW9 393 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 LPGAT1Q92604 370 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 DLG3Q92796 817 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 MAGOHBQ96A72 148 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 COL26A1Q96A83 441 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ZUFSPQ96AP4 578 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 BIRC8Q96P09 236 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 IP6K3Q96PC2 410 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 TCF12Q99081 682 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ACAT2Q9BWD1 397 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CHRNA10Q9GZZ6 450 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 SLC22A11Q9NSA0 550 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ABCF3Q9NUQ8 709 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 P4HTMQ9NXG6 502 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 IL1RAPL1Q9NZN1 696 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 STOX2Q9P2F5 926 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ANKMY1Q9P2S6 941 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 GALPQ9UBC7 116 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 ZC3H7BQ9UGR2 993 aaKnown RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 CDC23Q9UJX2 597 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 SRPK3Q9UPE1 567 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 PPP2R2CQ9Y2T4 447 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 MAU2Q9Y6X3 613 aa6.43□□□□□ -1.38
SCAF11-211ENST00000547950 UBR5O95071 2799 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-211ENST00000547950 A0A0J9YVX5 310 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 A0A1B0GX78 115 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 MAGEB16A2A368 324 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 HYKKA2RU49 373 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CTAGE9A4FU28 777 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SDR42E2A6NKP2 422 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 TARM1B6A8C7 271 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 E5RI56 91 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 H3BMM5 538 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 NRDCO43847 1150 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PRICKLE3O43900 615 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 SRPX2O60687 465 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 CTSVO60911 334 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 ALOX12BO75342 701 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 IGHEP01854 428 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 ESR1P03372 595 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 UMODP07911 640 aa6.42□□□□□ -1.38
SCAF11-211ENST00000547950 F7P08709 466 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PIM1P11309 404 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-211ENST00000547950 PKMP14618 531 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms