RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FLRT2O43155 660 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 UGDHO60701 494 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 SHOX2O60902 331 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 ESRRBO95718 433 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 CHRM5P08912 532 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 PNLIPP16233 465 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 HRH2P25021 359 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 ARL1P40616 181 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 GRK6P43250 576 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 CDH13P55290 713 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 ABATP80404 500 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 FASTKQ14296 549 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 ZXDCQ2QGD7 858 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 C17orf64Q86WR6 236 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 SLC35F3Q8IY50 421 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 LINC01555Q8NAE3 123 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 NAT6Q93015 286 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 NSUN5Q96P11 429 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 NTMT1Q9BV86 223 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 NOL11Q9H8H0 719 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 SEMA4GQ9NTN9 838 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 LRIT1Q9P2V4 623 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 HAO1Q9UJM8 370 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 ASB1Q9Y576 335 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 PCM1Q15154 2024 aa15.31■□□□□ 0.04
TRAFD1-203ENST00000547063 GMNCA6NCL1 334 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 OR6C74A6NCV1 312 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 C2orf74A8MZ97 194 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 SLCO1B7G3V0H7 640 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 TRIM38O00635 465 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 HGSO14964 777 aaPredicted RBP15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 SIGLEC6O43699 453 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 EDF1O60869 148 aaKnown RBP15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 ENO1P06733 434 aaKnown RBP15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 EBLN1P0CF75 366 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 NPPBP16860 134 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 AMD1P17707 334 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 SPEM2Q0P670 501 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 SUSD1Q6UWL2 747 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 DBX2Q6ZNG2 339 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 FAM47EQ6ZV65 393 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 GPRIN3Q6ZVF9 776 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 ZNF438Q7Z4V0 828 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 MILR1Q7Z6M3 343 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 CUZD1Q86UP6 607 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 SFTPA2Q8IWL1 248 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 ADGRF3Q8IZF5 1079 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 EID2Q8N6I1 236 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 OR2I1PQ8NGU4 316 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 GRAMD1AQ96CP6 724 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 FAR2Q96K12 515 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 APOLD1Q96LR9 279 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 ZNF317Q96PQ6 595 aaPredicted RBP15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 EHD1Q9H4M9 534 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 ACTR8Q9H981 624 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 ZBTB26Q9HCK0 441 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 MID1IP1Q9NPA3 183 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 TMEM9BQ9NQ34 198 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 PFDN4Q9NQP4 134 aa15.3■□□□□ 0.04
TRAFD1-203ENST00000547063 A0A1W2PPV9 198 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 OR5K3A6NET4 321 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 ISM1B1AKI9 464 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 PROB1E7EW31 1015 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 ITM2AO43736 263 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 CRCPO75575 148 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 UBXN7O94888 489 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 CLDN9O95484 217 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 CHEK2O96017 543 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 FGF4P08620 206 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 CMPK1P30085 196 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 HNF4AP41235 474 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 CASP2P42575 452 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 RPL14P50914 215 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 GPLD1P80108 840 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 IRF8Q02556 426 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 PRDX1Q06830 199 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 NR1D2Q14995 579 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 TBCCQ15814 346 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 GGTA1PQ4G0N0 100 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 LIPJQ5W064 366 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 RPS27LQ71UM5 84 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 WDR75Q8IWA0 830 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 LSMEM2Q8N112 164 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 LMNTD1Q8N9Z9 388 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 OR10G6Q8NH81 332 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 PIWIL2Q8TC59 973 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 AGAP11Q8TF27 550 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 SLC5A11Q8WWX8 675 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 PTCD3Q96EY7 689 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 OR4K3Q96R72 315 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 SORT1Q99523 831 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 EFCAB11Q9BUY7 163 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 EDEM2Q9BV94 578 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 TWSG1Q9GZX9 223 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 ABCF3Q9NUQ8 709 aa15.29■□□□□ 0.04
TRAFD1-203ENST00000547063 FAM86C1Q9NVL1 165 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms