RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 UAP1Q16222 522 aaPredicted RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 AGTRAPQ6RW13 159 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 RAPH1Q70E73 1250 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 CMC1Q7Z7K0 106 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 TBC1D1Q86TI0 1168 aaPredicted RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 PPP1R3BQ86XI6 285 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SYTL1Q8IYJ3 562 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 DNAJC22Q8N4W6 341 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 C2orf73Q8N5S3 287 aaPredicted RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 AENQ8WTP8 325 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 ZCCHC14Q8WYQ9 949 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 KIAA1191Q96A73 305 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 ZNF501Q96CX3 271 aaPredicted RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 MTBPQ96DY7 904 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 CNTNAP3BQ96NU0 1288 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 OR6C1Q96RD1 312 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SGPP1Q9BX95 441 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 CNTNAP3Q9BZ76 1288 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SNX15Q9NRS6 342 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 FGF21Q9NSA1 209 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 ARL15Q9NXU5 204 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 TLK1Q9UKI8 766 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 RARRES3Q9UL19 164 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 B3GALT1Q9Y5Z6 326 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 TLX3O43711 291 aaPredicted RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 CCNDBP1O95273 360 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 ANXA5P08758 320 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 LTA4HP09960 611 aaKnown RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 EBLN1P0CF75 366 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 COL6A2P12110 1019 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 PVRP15151 417 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 MAGP20916 626 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 CMPK1P30085 196 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 RPA3P35244 121 aaPredicted RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 EIF2S3P41091 472 aaKnown RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 FOXM1Q08050 763 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 TUBB3Q13509 450 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 BMPR2Q13873 1038 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 MAP7Q14244 749 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 TGFBIQ15582 683 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 TSNQ15631 228 aaKnown RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 FAM83EQ2M2I3 478 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 ICE2Q659A1 982 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 FIGLAQ6QHK4 219 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 CDHR3Q6ZTQ4 885 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 ISCA2Q86U28 154 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 DTX1Q86Y01 620 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 ZNF248Q8NDW4 579 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 OR56A3Q8NH54 315 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 RHEBL1Q8TAI7 183 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 UHMK1Q8TAS1 419 aaKnown RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 STAG3L4Q8TBR4 150 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 DPH1Q9BZG8 443 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 APMAPQ9HDC9 416 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 CCDC177Q9NQR7 707 aaPredicted RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 IGSF5Q9NSI5 407 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 SOHLH2Q9NX45 425 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 FOXJ2Q9P0K8 574 aa13.93□□□□□ -0.18
DDX54-203ENST00000546869 TMEM184BQ9Y519 407 aaPredicted RBP13.93□□□□□ -0.18
DDX54-203ENST00000546869 CHD8Q9HCK8 2581 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 A0A096LPK6 155 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 NPEPPSL1A6NEC2 478 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 KLHL2O95198 593 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 GGT5P36269 586 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 DLG1Q12959 904 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 CSHL1Q14406 222 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 KCNAB1Q14722 419 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 ACAP2Q15057 778 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 KIF26BQ2KJY2 2108 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 ZXDCQ2QGD7 858 aaPredicted RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 TAF1BQ53T94 588 aaPredicted RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 ZC3H12BQ5HYM0 836 aaKnown RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 FCRL6Q6DN72 434 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 CAPN13Q6MZZ7 669 aaPredicted RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 SUSD1Q6UWL2 747 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 LCTLQ6UWM7 567 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 TRIM73Q86UV7 250 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 TDRPQ86YL5 185 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 KLHDC8AQ8IYD2 350 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 CENPLQ8N0S6 344 aaPredicted RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 TCAIMQ8N3R3 496 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 UBLCP1Q8WVY7 318 aaPredicted RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 PMEPA1Q969W9 287 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 CABS1Q96KC9 395 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 MIPEPQ99797 713 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 CTRCQ99895 268 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 FAM60AQ9NP50 221 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 MRPS30Q9NP92 439 aaKnown RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 UTP6Q9NYH9 597 aaKnown RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDX54-203ENST00000546869 SERTAD3Q9UJW9 196 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 PILRAQ9UKJ1 303 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 SNX7Q9UNH6 387 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 PLCL2Q9UPR0 1127 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms