RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FLNBO75369 2602 aaKnown RBP8.98□□□□□ -0.97
YBX3-218ENST00000546298 FITM1A5D6W6 292 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 VPS26AO75436 327 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 USP1O94782 785 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CCNDBP1O95273 360 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CTSBP07858 339 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 ENO3P13929 434 aaPredicted RBP8.97□□□□□ -0.97
YBX3-218ENST00000546298 MMP11P24347 488 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 RPA3P35244 121 aaPredicted RBP8.97□□□□□ -0.97
YBX3-218ENST00000546298 GCGRP47871 477 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 FNTAP49354 379 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 SOX8P57073 446 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 VSX2P58304 361 aaPredicted RBP8.97□□□□□ -0.97
YBX3-218ENST00000546298 ABATP80404 500 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 MYBPC3Q14896 1274 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 SLC9A5Q14940 896 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CYP1B1Q16678 543 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 MUM1Q2TAK8 710 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 KLHL38Q2WGJ6 581 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CCSMST1Q4G0I0 132 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 NADK2Q4G0N4 442 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 WASHC2DQ5SRD0 308 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 IRAK1BP1Q5VVH5 260 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 ANKRD22Q5VYY1 191 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 ZNF470Q6ECI4 717 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 JMJD6Q6NYC1 403 aaPredicted RBP8.97□□□□□ -0.97
YBX3-218ENST00000546298 PRMT9Q6P2P2 845 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 TTC27Q6P3X3 843 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CENPUQ71F23 418 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CAND1Q86VP6 1230 aaKnown RBP8.97□□□□□ -0.97
YBX3-218ENST00000546298 GALNT16Q8N428 558 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 OR2A1Q8NGT9 310 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 ACTRT1Q8TDG2 376 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 PNPLA2Q96AD5 504 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 SERPINB12Q96P63 405 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 FAM167BQ9BTA0 163 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 NUDT9Q9BW91 350 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 SLC26A1Q9H2B4 701 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 MRPS30Q9NP92 439 aaKnown RBP8.97□□□□□ -0.97
YBX3-218ENST00000546298 ANKMY1Q9P2S6 941 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 CDC14AQ9UNH5 594 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 MAD1L1Q9Y6D9 718 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 COMMD10Q9Y6G5 202 aa8.97□□□□□ -0.97
YBX3-218ENST00000546298 A0A0J9YVX5 310 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ZCWPW2A0A1B0GU75 182 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 A0A1W2PPV9 198 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 HYKKA2RU49 373 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 OR2A25A4D2G3 310 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ARHGEF33A8MVX0 844 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 GOLGA8MH3BSY2 632 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 AGPSO00116 658 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 MYO1CO00159 1063 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 PRPF4O43172 522 aaKnown RBP eCLIP8.96□□□□□ -0.98
YBX3-218ENST00000546298 KIF5CO60282 957 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 CTSVO60911 334 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 CNOT3O75175 753 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 PSIP1O75475 530 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 SORBS2O94875 1100 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 UMODP07911 640 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 MPC1LP0DKB6 136 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ERVK-10P10266 1014 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 CARSP49589 748 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 EMP3P54852 163 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 OCA2Q04671 838 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 AIMP2Q13155 320 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 TSTA3Q13630 321 aaPredicted RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 PPP1R7Q15435 360 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 INPP5JQ15735 1006 aaPredicted RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 NKG7Q16617 165 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 LONRF1Q17RB8 773 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ACSBG2Q5FVE4 666 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 LRRC8EQ6NSJ5 796 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 IGFL3Q6UXB1 125 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 PPP1R32Q7Z5V6 425 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 PPIL6Q8IXY8 311 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ZADH2Q8N4Q0 377 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 FBXO15Q8NCQ5 510 aaPredicted RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 KCNJ9Q92806 393 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 INPP5DQ92835 1189 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 FAM136AQ96C01 138 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 MS4A14Q96JA4 679 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 OSBPL9Q96SU4 736 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ZFYVE21Q9BQ24 234 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 DPH7Q9BTV6 452 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 MFRPQ9BY79 579 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 SLC29A3Q9BZD2 475 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ZNF304Q9HCX3 659 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 SEMA3GQ9NS98 782 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 SLC22A11Q9NSA0 550 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 C20orf96Q9NUD7 363 aaPredicted RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 ZC3H7BQ9UGR2 993 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 TSR3Q9UJK0 312 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 CDC23Q9UJX2 597 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 FBXO5Q9UKT4 447 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 RUVBL2Q9Y230 463 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 NEU2Q9Y3R4 380 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 SEC16AO15027 2179 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms