RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CLCN7P51798 805 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CLDN8P56748 225 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ERVPABLB-1P60509 514 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 MAXP61244 160 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 AP1S1P61966 158 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OLR1P78380 273 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SLC35A2P78381 396 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ECT2LQ008S8 904 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF45Q02386 682 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 DSC1Q08554 894 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TRAF3Q13114 568 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ITGADQ13349 1161 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 VEZF1Q14119 521 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 BOP1Q14137 746 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PLCL1Q15111 1095 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 HIST2H2ACQ16777 129 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TIMM50Q3ZCQ8 353 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 FUT11Q495W5 492 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 GPR33Q49SQ1 333 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ALFQ53S48 1182 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PERM1Q5SV97 790 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 C10orf62Q5T681 223 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 UBE2UQ5VVX9 321 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SLX4IPQ5VYV7 408 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ZDHHC20Q5W0Z9 365 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 KDM4DQ6B0I6 523 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SLC2A7Q6PXP3 512 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TBPL2Q6SJ96 375 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 GLB1LQ6UWU2 654 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PLEKHG7Q6ZR37 379 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 LRRC70Q7Z2Q7 622 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 GOLGA7Q7Z5G4 137 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ADCK1Q86TW2 530 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ITIH5Q86UX2 942 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SCN4BQ8IWT1 228 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CACTIN-AS1Q8N1I8 211 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CBARPQ8N350 705 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.31□□□□□ -1.44e-11■■□□□ 12.1
SNHG1-225ENST00000545920 AMER2Q8N7J2 671 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CDYL2Q8N8U2 506 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 BPIFB6Q8NFQ5 453 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OR4K2Q8NGD2 314 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OR6Q1Q8NGQ2 317 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OR13C4Q8NGS5 318 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OR2T11Q8NH01 316 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 C9orf43Q8TAL5 461 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CSGALNACT1Q8TDX6 532 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 FAR1Q8WVX9 515 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 BRI3BPQ8WY22 251 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TRIB2Q92519 343 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 USP7Q93009 1102 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 FBXO32Q969P5 355 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 RHBDF1Q96CC6 855 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 YIPF6Q96EC8 236 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 FAM120BQ96EK7 910 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TEX37Q96LM6 180 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PPM1MQ96MI6 270 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 KLHL5Q96PQ7 755 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF300Q96RE9 604 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 KCNA7Q96RP8 456 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 YME1L1Q96TA2 773 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CPPED1Q9BRF8 314 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 THUMPD3Q9BV44 507 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TTLL2Q9BWV7 592 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CLPBQ9H078 707 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ACTL8Q9H568 366 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SOX17Q9H6I2 414 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SYNDIG1Q9H7V2 258 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 LRTM1Q9HBL6 345 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 IL1RAPQ9NPH3 570 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 THG1LQ9NWX6 298 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 CCDC59Q9P031 241 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 GALPQ9UBC7 116 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 MTRRQ9UBK8 725 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 OPTCQ9UBM4 332 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 EIF2B4Q9UI10 523 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 INTS6Q9UL03 887 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 SLC6A14Q9UN76 642 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 FAM32AQ9Y421 112 aaKnown RBP6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TIMM22Q9Y584 194 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 KCTD3Q9Y597 815 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 ANGPTL3Q9Y5C1 460 aa6.31□□□□□ -1.4
SNHG1-225ENST00000545920 TRBV5-4A0A0C4DH59 114 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-225ENST00000545920 A0A1B0GVM2 712 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SLC12A8A0AV02 714 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 KRBA1A5PL33 1030 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 TMEM247A6NEH6 219 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 LRRC14BA6NHZ5 514 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 ANKRD66B4E2M5 251 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PLK4O00444 970 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 PPP6CO00743 305 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 MUSKO15146 869 aa6.3□□□□□ -1.4
SNHG1-225ENST00000545920 SLC16A5O15375 505 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms