RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SMARCAD1Q9H4L7 1026 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 NUDT4Q9NZJ9 180 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 B3GAT1Q9P2W7 334 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 DAPK2Q9UIK4 370 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 ZNF148Q9UQR1 794 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 GRIP1Q9Y3R0 1128 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 SHPRHQ149N8 1683 aa3.93□□□□□ -1.78
SNHG1-224ENST00000545688 PHLPP1O60346 1717 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 UTRNP46939 3433 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CCNB3Q8WWL7 1395 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 PTGES3LE9PB15 166 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 EPB41L2O43491 1005 aaKnown RBP3.92□□□□□ -1.78
SNHG1-224ENST00000545688 MAGEC1O60732 1142 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 PTP4A3O75365 173 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 MED24O75448 989 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CAPN2P17655 700 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CYP2A7P20853 494 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 ACSL1P33121 698 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 SLC15A1P46059 708 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 GSCP56915 257 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-224ENST00000545688 HUNKP57058 714 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 SIRPAP78324 504 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 MS4A2Q01362 244 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 AIMP2Q13155 320 aaKnown RBP3.92□□□□□ -1.78
SNHG1-224ENST00000545688 IDI1Q13907 227 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 NR1D2Q14995 579 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 SPDYCQ5MJ68 293 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 C20orf194Q5TEA3 1177 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CCDC30Q5VVM6 783 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 FAAH2Q6GMR7 532 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 TMPRSS11FQ6ZWK6 438 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 BRINP3Q76B58 766 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 BTN2A1Q7KYR7 527 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 ERC1Q8IUD2 1116 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 EID3Q8N140 333 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 OR10G8Q8NGN5 311 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 VANGL1Q8TAA9 524 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-224ENST00000545688 HDAC2Q92769 488 aaKnown RBP3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CCDC34Q96HJ3 373 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 NEK1Q96PY6 1258 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 WWTR1Q9GZV5 400 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CPVLQ9H3G5 476 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 P4HTMQ9NXG6 502 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.92□□□□□ -1.78
SNHG1-224ENST00000545688 MAST1Q9Y2H9 1570 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 CCDC141Q6ZP82 1450 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 BCL9LQ86UU0 1499 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 FYCO1Q9BQS8 1478 aa3.92□□□□□ -1.78
SNHG1-224ENST00000545688 C15orf61A6NNL5 157 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 PRAMEF11O60813 436 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 ATRNO75882 1429 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 ZFYVE9O95405 1425 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 NOS1P29475 1434 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 CCR10P46092 362 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 ARSEP51690 589 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 ELAVL2Q12926 359 aaKnown RBP3.91□□□□□ -1.78
SNHG1-224ENST00000545688 RIGQ13278 110 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 RTN4RL2Q86UN3 420 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 CDK20Q8IZL9 346 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 Q8N377 158 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 FBXO39Q8N4B4 442 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-224ENST00000545688 NPEPL1Q8NDH3 523 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 OR11H4Q8NGC9 324 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 OR52N5Q8NH56 324 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 GTF3AQ92664 365 aaKnown RBP3.91□□□□□ -1.78
SNHG1-224ENST00000545688 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
SNHG1-224ENST00000545688 SHARPINQ9H0F6 387 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 MYH16Q9H6N6 1097 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 TBC1D17Q9HA65 648 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 SPHK2Q9NRA0 654 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 FAM120CQ9NX05 1096 aaKnown RBP3.91□□□□□ -1.78
SNHG1-224ENST00000545688 THEGQ9P2T0 379 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 PPP2R2CQ9Y2T4 447 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 LRP5O75197 1615 aa3.91□□□□□ -1.78
SNHG1-224ENST00000545688 KDM5AP29375 1690 aaKnown RBP3.9□□□□□ -1.78
SNHG1-224ENST00000545688 MTUS2Q5JR59 1369 aa3.9□□□□□ -1.78
SNHG1-224ENST00000545688 PNPLA6Q8IY17 1366 aa3.9□□□□□ -1.78
SNHG1-224ENST00000545688 CEP162Q5TB80 1403 aa3.9□□□□□ -1.78
SNHG1-224ENST00000545688 CEP350Q5VT06 3117 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 VILLO15195 856 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 CREB3O43889 395 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 PNLIPRP2P54317 469 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 MAZP56270 477 aaKnown RBP3.9□□□□□ -1.79
SNHG1-224ENST00000545688 ARF3P61204 181 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-224ENST00000545688 ARF1P84077 181 aaKnown RBP3.9□□□□□ -1.79
SNHG1-224ENST00000545688 COX10Q12887 443 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 NFATC2Q13469 925 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 RAB41Q5JT25 222 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 ELFN2Q5R3F8 820 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 TMEM207Q6UWW9 146 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 CEP57Q86XR8 500 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 C1orf131Q8NDD1 294 aaKnown RBP3.9□□□□□ -1.79
SNHG1-224ENST00000545688 OR2B2Q9GZK3 357 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 ARHGEF38Q9NXL2 777 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 WSB2Q9NYS7 404 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-224ENST00000545688 MYH14Q7Z406 1995 aaKnown RBP3.9□□□□□ -1.79
SNHG1-224ENST00000545688 ZNF541Q9H0D2 1346 aa3.9□□□□□ -1.79
SNHG1-224ENST00000545688 PIK3R4Q99570 1358 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms