RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 ESPL1Q14674 2120 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 SPTAN1Q13813 2472 aaKnown RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 E7EVH7 732 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 PRICKLE3O43900 615 aaPredicted RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 KDM1AO60341 852 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 SLCO2B1O94956 709 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 CBX6O95503 412 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 ONECUT2O95948 504 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 CD63P08962 238 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 ZSCAN5DPP0CG00 497 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 AOAHP28039 575 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 SOX8P57073 446 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 PRAMEP78395 509 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 TAGLNQ01995 201 aaKnown RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 HIF1AQ16665 826 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 CRB2Q5IJ48 1285 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 FIGLAQ6QHK4 219 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 IGFL3Q6UXB1 125 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 TTLL10Q6ZVT0 673 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 COX15Q7KZN9 410 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 OVCH1Q7RTY7 1134 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 GAS2L3Q86XJ1 694 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 SLC13A5Q86YT5 568 aaPredicted RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 LURAP1LQ8IV03 231 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 DCUN1D3Q8IWE4 304 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 CLEC1AQ8NC01 280 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 OR2L8Q8NGY9 312 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 ASZ1Q8WWH4 475 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 ATP13A2Q9NQ11 1180 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 CHRAC1Q9NRG0 131 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 CUEDC1Q9NWM3 386 aaPredicted RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.12□□□□□ -1.11
USP28-215ENST00000545608 B3GNT3Q9Y2A9 372 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 PIKFYVEQ9Y2I7 2098 aa8.12□□□□□ -1.11
USP28-215ENST00000545608 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 FER1L5A0AVI2 2057 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 A0A1B0GX78 115 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 A1L4Q6 167 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 KRT87PA6NCN2 255 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 F8W8V4 182 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 AGPSO00116 658 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 PRMT5O14744 637 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 RASGRF2O14827 1237 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 ALOX12BO75342 701 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 MED26O95402 600 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 IGHEP01854 428 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 APOA4P06727 396 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 APRTP07741 180 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 MMP11P24347 488 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 RPL22P35268 128 aaKnown RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 PPARGP37231 505 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 OR1D4P47884 311 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 GLRBP48167 497 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 ARSFP54793 590 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 SESN2P58004 480 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 CRADDP78560 199 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 SIX1Q15475 284 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 SF1Q15637 639 aaKnown RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 NKG7Q16617 165 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 CYP2A13Q16696 494 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 CCSMST1Q4G0I0 132 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 PCID2Q5JVF3 399 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 SEL1L2Q5TEA6 688 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 UNC5DQ6UXZ4 953 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 Q6ZS92 163 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 NLRP9Q7RTR0 991 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 CUZD1Q86UP6 607 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 ZNF295-AS1Q8N0V1 137 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 IQCKQ8N0W5 287 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 ZADH2Q8N4Q0 377 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 DTWD1Q8N5C7 304 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 PPHLN1Q8NEY8 458 aaKnown RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 DLG3Q92796 817 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 PEX13Q92968 403 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 SLC22A18Q96BI1 424 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 ZNF285Q96NJ3 590 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 TSSK1BQ9BXA7 367 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 FRMD8P1Q9BZ68 369 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 SLC29A3Q9BZD2 475 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 P2RY12Q9H244 342 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 SLC6A20Q9NP91 592 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 CUTCQ9NTM9 273 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 CATSPERZQ9NTU4 200 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 PAK5Q9P286 719 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 ERRFI1Q9UJM3 462 aaPredicted RBP8.11□□□□□ -1.11
USP28-215ENST00000545608 ANAPC5Q9UJX4 755 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 FBXL4Q9UKA2 621 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 SLC39A10Q9ULF5 831 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 NTNG1Q9Y2I2 539 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 CSAG2Q9Y5P2 127 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 NFS1Q9Y697 457 aa8.11□□□□□ -1.11
USP28-215ENST00000545608 WIPF3A6NGB9 483 aa8.1□□□□□ -1.11
USP28-215ENST00000545608 SOCS6O14544 535 aa8.1□□□□□ -1.11
USP28-215ENST00000545608 DSCR3O14972 297 aa8.1□□□□□ -1.11
USP28-215ENST00000545608 CD3EAPO15446 510 aaKnown RBP8.1□□□□□ -1.11
USP28-215ENST00000545608 NRP2O60462 931 aa8.1□□□□□ -1.11
USP28-215ENST00000545608 KLHL41O60662 606 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms