RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ZNF366Q8N895 744 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ATG16L2Q8NAA4 619 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 ZNF540Q8NDQ6 660 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 KLF16Q9BXK1 252 aaPredicted RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 REXO4Q9GZR2 422 aaKnown RBP14.64□□□□□ -0.07
USP28-214ENST00000545540 ZDHHC6Q9H6R6 413 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 SIRT5Q9NXA8 310 aa14.64□□□□□ -0.07
USP28-214ENST00000545540 PLXNA4Q9HCM2 1894 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 NADKO95544 446 aaPredicted RBP14.63□□□□□ -0.07
USP28-214ENST00000545540 ENGP17813 658 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 NUDT6P53370 316 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 CYP4F2P78329 520 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 IFITM3Q01628 133 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 CCSMST1Q4G0I0 132 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 AHSA2Q719I0 299 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 B3GNT8Q7Z7M8 397 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 ADHFE1Q8IWW8 467 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 MED8Q96G25 268 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 GMEB1Q9Y692 573 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 SAP18O00422 153 aaKnown RBP14.63□□□□□ -0.07
USP28-214ENST00000545540 AOC2O75106 756 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 IL6P05231 212 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 MSH3P20585 1137 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 FXNQ16595 210 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 C5orf22Q49AR2 442 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 PYURFQ96I23 114 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 MAGEE1Q9HCI5 957 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 ITM2CQ9NQX7 267 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 AASDHPPTQ9NRN7 309 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 C3orf18Q9UK00 162 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 RBMX2Q9Y388 322 aaKnown RBP14.63□□□□□ -0.07
USP28-214ENST00000545540 YIPF1Q9Y548 306 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 GBF1Q92538 1859 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 ANXA5P08758 320 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 POU2F1P14859 743 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 LHCGRP22888 699 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 GSTM2P28161 218 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 OR1E2P47887 323 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 CLK3P49761 638 aaKnown RBP14.63□□□□□ -0.07
USP28-214ENST00000545540 RELAQ04206 551 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 UAP1L1Q3KQV9 507 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 CRTC1Q6UUV9 634 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 TMEM150AQ86TG1 271 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 ADAMTS19Q8TE59 1207 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 RAB2BQ8WUD1 216 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 HDAC2Q92769 488 aaKnown RBP14.63□□□□□ -0.07
USP28-214ENST00000545540 HERC2P3Q9BVR0 1158 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 PCDHB1Q9Y5F3 818 aa14.63□□□□□ -0.07
USP28-214ENST00000545540 A8MU76 341 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 CA12O43570 354 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 MT-ND2P03891 347 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 C7P10643 843 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 PBLDP30039 288 aaPredicted RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 TTKP33981 857 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 TMBIM6P55061 237 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 CTF1Q16619 201 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 TRIM16LQ309B1 348 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 IER5LQ5T953 404 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 NXPE1Q8N323 547 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 FAR1Q8WVX9 515 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 SH3KBP1Q96B97 665 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 RNF167Q9H6Y7 350 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 INTS6Q9UL03 887 aaKnown RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 SAMHD1Q9Y3Z3 626 aaKnown RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 ORC6Q9Y5N6 252 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 H7C0S8 307 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 M0R3G1 203 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 SLC28A1O00337 649 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 TUFMP49411 452 aaKnown RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 LMAN2Q12907 356 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 CHIT1Q13231 466 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 GBX1Q14549 363 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 CPZQ66K79 652 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 GPR149Q86SP6 731 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 CHPFQ8IZ52 775 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 SORCS1Q8WY21 1168 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 KCNC2Q96PR1 638 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 CPPED1Q9BRF8 314 aaPredicted RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 MTRRQ9UBK8 725 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 GMPPBQ9Y5P6 360 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 A0A096LPI6 279 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 C16orf96A6NNT2 1141 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 ZNF701M0R085 212 aaPredicted RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 CLIC1O00299 241 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 INPPL1O15357 1258 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 ADAM23O75077 832 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 NPPAP01160 153 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 KRT6AP02538 564 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 KRT6BP04259 564 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 C21orf33P30042 268 aaPredicted RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 CD6P30203 668 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 KRT6CP48668 564 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 RGS21Q2M5E4 152 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 OR5K1Q8NHB7 308 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 SH3YL1Q96HL8 342 aaPredicted RBP14.62□□□□□ -0.07
USP28-214ENST00000545540 TTLL2Q9BWV7 592 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 KIF17Q9P2E2 1029 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 RAPGEFL1Q9UHV5 662 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 OR51B4Q9Y5P0 310 aa14.62□□□□□ -0.07
USP28-214ENST00000545540 H7C4K7 107 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms