RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TREX1Q9NSU2 369 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 HRASLS2Q9NWW9 162 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 SLC2A6Q9UGQ3 507 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 POMT2Q9UKY4 750 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 BTRCQ9Y297 605 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 JRKLQ9Y4A0 524 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 TNRC6AQ8NDV7 1962 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 UBA6A0AVT1 1052 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 OR6C74A6NCV1 312 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 MT-ND3P03897 115 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 OR56A5P0C7T3 313 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 EBLN1P0CF75 366 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 ZSCAN5DPP0CG00 497 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF28P17035 718 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 HSD3B2P26439 372 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 PDHA2P29803 388 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 CXCR5P32302 372 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 MAGEA6P43360 314 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TTPAP49638 278 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 KPNA2P52292 529 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TUBB4BP68371 445 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TUBB2AQ13885 445 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 BOP1Q14137 746 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 LY6DQ14210 128 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 KCNJ11Q14654 390 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 CYP1B1Q16678 543 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 SYTL3Q4VX76 610 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 FASTKD1Q53R41 847 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 PCID2Q5JVF3 399 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 NKAPLQ5M9Q1 402 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 MICALCLQ6ZW33 695 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF534Q76KX8 674 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TIPARPQ7Z3E1 657 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 RASGRP3Q8IV61 690 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 D2HGDHQ8N465 521 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 PRELID2Q8N945 189 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 SIDT2Q8NBJ9 832 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 OR52E1Q8NGJ3 308 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 OR4L1Q8NH43 312 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 OR8K5Q8NH50 307 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 LCN9Q8WX39 176 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TFGQ92734 400 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 EXTL1Q92935 676 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 STAMBPL1Q96FJ0 436 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 PBKQ96KB5 322 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 HRASLS5Q96KN8 279 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF778Q96MU6 729 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 CATSPER2Q96P56 530 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 NAP1L3Q99457 506 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 AARSD1Q9BTE6 412 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 HGH1Q9BTY7 390 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TUBB2BQ9BVA1 445 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TSSK1BQ9BXA7 367 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 PITPNM3Q9BZ71 974 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 SRMSQ9H3Y6 488 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 FGF21Q9NSA1 209 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 CATSPERZQ9NTU4 200 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 BFARQ9NZS9 450 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 LNPEPQ9UIQ6 1025 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 RARRES3Q9UL19 164 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 TTC7AQ9ULT0 858 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 PRSS21Q9Y6M0 314 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 RPS6KL1Q9Y6S9 549 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 DOCK10Q96BY6 2186 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF462Q96JM2 2506 aa7.44□□□□□ -1.22
SNHG1-223ENST00000545440 HELZ2Q9BYK8 2649 aaKnown RBP7.44□□□□□ -1.22
SNHG1-223ENST00000545440 LOC101059948A0A1B0GTJ6 334 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SLC5A10A0PJK1 596 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 GSAPA4D1B5 854 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 PGRMC1O00264 195 aaKnown RBP7.43□□□□□ -1.22
SNHG1-223ENST00000545440 BTN3A1O00481 513 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 ZSCAN12O43309 604 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 KDM1AO60341 852 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 OR1I1O60431 355 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SPAG6O75602 509 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 KIAA0754O94854 1291 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 KCNH1O95259 989 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SFTPCP11686 197 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 FOLR1P15328 257 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 POLR2CP19387 275 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-223ENST00000545440 ACADLP28330 430 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SHMT2P34897 504 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 KCNJ1P48048 391 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 ARCN1P48444 511 aaKnown RBP7.43□□□□□ -1.22
SNHG1-223ENST00000545440 NPY2RP49146 381 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SESN2P58004 480 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-223ENST00000545440 MC1RQ01726 317 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 CDC20Q12834 499 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SEMA3AQ14563 771 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 KCNAB1Q14722 419 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 LINC00303Q3SY05 128 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 DNAJC21Q5F1R6 531 aaKnown RBP7.43□□□□□ -1.22
SNHG1-223ENST00000545440 TMTC4Q5T4D3 741 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 LRRC8BQ6P9F7 803 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 BORAQ6PGQ7 559 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 SPATC1Q76KD6 591 aa7.43□□□□□ -1.22
SNHG1-223ENST00000545440 FAM214BQ7L5A3 538 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms