RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	COX16	Q9P0S2	106 aa		6.54	□□□□□ -1.36
LDHA-223	ENST00000545215	LRFN1	Q9P244	771 aa		6.54	□□□□□ -1.36
LDHA-223	ENST00000545215	JRKL	Q9Y4A0	524 aa		6.54	□□□□□ -1.36
LDHA-223	ENST00000545215	CSAG2	Q9Y5P2	127 aa		6.54	□□□□□ -1.36
LDHA-223	ENST00000545215	ALG6	Q9Y672	507 aa		6.54	□□□□□ -1.36
LDHA-223	ENST00000545215	TRPM6	Q9BX84	2022 aa		6.54	□□□□□ -1.36
LDHA-223	ENST00000545215		A0A0A6YYJ9	748 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TCAF2	A6NFQ2	919 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	ZNF839	A8K0R7	811 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215		A8MU76	341 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TOR1B	O14657	336 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	ALOX15B	O15296	676 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	BUB1	O43683	1085 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	ZNF189	O75820	626 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	UNC5C	O95185	931 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	MT-ND3	P03897	115 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	PROC	P04070	461 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	MIP	P30301	263 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TNNT3	P45378	269 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	HCAR3	P49019	387 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	RPS15	P62841	145 aa	Known RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	OGDH	Q02218	1023 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	SULT2A1	Q06520	285 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	KRTAP1-1	Q07627	177 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	SGCG	Q13326	291 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	SLC12A1	Q13621	1099 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	KRT72	Q14CN4	511 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	DPYSL2	Q16555	572 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	KYNU	Q16719	465 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	CDO1	Q16878	200 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	C15orf59	Q2T9L4	293 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	ALG11	Q2TAA5	492 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	OTUD1	Q5VV17	481 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TRNP1	Q6NT89	227 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	SCYL2	Q6P3W7	929 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TEPP	Q6URK8	271 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	FAM131B	Q86XD5	332 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	CDC20B	Q86Y33	519 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	DNAAF5	Q86Y56	855 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	REXO1L1P	Q8IX06	675 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	KRT78	Q8N1N4	520 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	CDYL2	Q8N8U2	506 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	LRRC57	Q8N9N7	239 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	GOT1L1	Q8NHS2	421 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	NR4A3	Q92570	626 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TSACC	Q96A04	125 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	RBM41	Q96IZ5	413 aa	Known RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	RPRD1A	Q96P16	312 aa	Predicted RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	FEM1A	Q9BSK4	669 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	RNF32	Q9H0A6	362 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	BRD8	Q9H0E9	1235 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	ZWILCH	Q9H900	591 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	RASSF1	Q9NS23	344 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	AMFR	Q9UKV5	643 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	PYCARD	Q9ULZ3	195 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	MEMO1	Q9Y316	297 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	PLEKHM1	Q9Y4G2	1056 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	DUSP10	Q9Y6W6	482 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	DYSF	O75923	2080 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TENM1	Q9UKZ4	2725 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	TRRAP	Q9Y4A5	3859 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	HCFC1	P51610	2035 aa		6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	PRKDC	P78527	4128 aa	Known RBP	6.53	□□□□□ -1.36
LDHA-223	ENST00000545215	GRID2IP	A4D2P6	1211 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	TMEM110-MUSTN1	A8MSY1	372 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215		B4DGG1	531 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	PALM	O75781	387 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	MED26	O95402	600 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	ENO2	P09104	434 aa	Predicted RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	ZFX	P17010	805 aa	Predicted RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	COMT	P21964	271 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	IL4R	P24394	825 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	CTNNA2	P26232	953 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	CTNNA1	P35221	906 aa	Known RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	RWDD2B	P57060	319 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	PRR5	P85299	388 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	SLC25A11	Q02978	314 aa	Known RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	TFF3	Q07654	80 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	ZNF169	Q14929	603 aa	Predicted RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	RPS6KA1	Q15418	735 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	C3AR1	Q16581	482 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	C5orf22	Q49AR2	442 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	ACCSL	Q4AC99	568 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	RNF220	Q5VTB9	566 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	HEPHL1	Q6MZM0	1159 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	RPUSD3	Q6P087	351 aa	Known RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	TAF8	Q7Z7C8	310 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	NT5DC3	Q86UY8	548 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	KATNAL2	Q8IYT4	538 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	RCOR2	Q8IZ40	523 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	DENND6B	Q8NEG7	585 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	VPS37A	Q8NEZ2	397 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	EXD1	Q8NHP7	514 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	DNAJB14	Q8TBM8	379 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	FAM71B	Q8TC56	605 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	PPP4R1	Q8TF05	950 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	ASB12	Q8WXK4	309 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	ZMYND19	Q96E35	227 aa	Predicted RBP	6.52	□□□□□ -1.37
LDHA-223	ENST00000545215		Q96MF0	132 aa		6.52	□□□□□ -1.37
LDHA-223	ENST00000545215	GPATCH1	Q9BRR8	931 aa	Known RBP	6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms