RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	MAN2B2	Q9Y2E5	1009 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	HEMK1	Q9Y5R4	338 aa	Predicted RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	OR2A25	A4D2G3	310 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	ZNF839	A8K0R7	811 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015		C9J4A7	227 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	MKRN2OS	H3BPM6	223 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	NDC80	O14777	642 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	SEC31A	O94979	1220 aa	Known RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	GABRB3	P28472	473 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	DCD	P81605	110 aa	Known RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	RELA	Q04206	551 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	UGT3A1	Q6NUS8	523 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	MRPL14	Q6P1L8	145 aa	Known RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	RNF44	Q7L0R7	432 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	IGDCC3	Q8IVU1	814 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	FAM20C	Q8IXL6	584 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	KLHL7	Q8IXQ5	586 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	ZNF655	Q8N720	491 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	FAM136A	Q96C01	138 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	CERS2	Q96G23	380 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	PKP4	Q99569	1192 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	GPR21	Q99679	349 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	WDR83	Q9BRX9	315 aa	Known RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	NDC1	Q9BTX1	674 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	MLXIPL	Q9NP71	852 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	IARS2	Q9NSE4	1012 aa	Known RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	ANAPC2	Q9UJX6	822 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	SNX7	Q9UNH6	387 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	PADI2	Q9Y2J8	665 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	KLHL20	Q9Y2M5	609 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.86	□□□□□ -0.35
POLE-222	ENST00000545015	TEX264	Q9Y6I9	313 aa		12.86	□□□□□ -0.35
POLE-222	ENST00000545015	KRT87P	A6NCN2	255 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015		E7ENX8	843 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015		E7ESA3	106 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TTI1	O43156	1089 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	CTSV	O60911	334 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	VPS26A	O75436	327 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	CEACAM4	O75871	244 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	ALB	P02768	609 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	ERVK-10	P10266	1014 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	CMPK1	P30085	196 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	ELK3	P41970	407 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	PNLIPRP1	P54315	467 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	EMP3	P54852	163 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TAP2	Q03519	686 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	FASTK	Q14296	549 aa	Known RBP	12.85	□□□□□ -0.35
POLE-222	ENST00000545015	GRM7	Q14831	915 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	BBS9	Q3SYG4	887 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	NKAIN1	Q4KMZ8	207 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	LACTB2	Q53H82	288 aa	Predicted RBP	12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TEDDM1	Q5T9Z0	273 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	ATG14	Q6ZNE5	492 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TAX1BP1	Q86VP1	789 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	LRRC56	Q8IYG6	542 aa	Predicted RBP	12.85	□□□□□ -0.35
POLE-222	ENST00000545015	FKBP10	Q96AY3	582 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	NACC2	Q96BF6	587 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	SNF8	Q96H20	258 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	IP6K3	Q96PC2	410 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	SLC26A1	Q9H2B4	701 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	SLC22A11	Q9NSA0	550 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TXLNG	Q9NUQ3	528 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TAS2R13	Q9NYV9	303 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	DHCR7	Q9UBM7	475 aa	Known RBP	12.85	□□□□□ -0.35
POLE-222	ENST00000545015	TLK1	Q9UKI8	766 aa		12.85	□□□□□ -0.35
POLE-222	ENST00000545015	SNRNP200	O75643	2136 aa	Known RBP	12.85	□□□□□ -0.35
POLE-222	ENST00000545015		A0A1B0GX78	115 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	DSCR3	O14972	297 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ZBTB14	O43829	449 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	SLC28A2	O43868	658 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	BANF1	O75531	89 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	SLC16A8	O95907	504 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	AHSG	P02765	367 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	F7	P08709	466 aa	Predicted RBP	12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ITGAX	P20702	1163 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	PSMB5	P28074	263 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ITGA8	P53708	1063 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ARL4C	P56559	192 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ABAT	P80404	500 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	NFKB2	Q00653	900 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	PRDX1	Q06830	199 aa	Known RBP	12.84	□□□□□ -0.35
POLE-222	ENST00000545015	CUL1	Q13616	776 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	SSPN	Q14714	243 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	HIF1A	Q16665	826 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	FAM214A	Q32MH5	1076 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ZNF425	Q6IV72	752 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	PAQR7	Q86WK9	346 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	CPNE9	Q8IYJ1	553 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.84	□□□□□ -0.35
POLE-222	ENST00000545015	OR2Y1	Q8NGV0	311 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ZNF480	Q8WV37	535 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	MIPEP	Q99797	713 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	PLCD4	Q9BRC7	762 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	TRIM51	Q9BSJ1	452 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.84	□□□□□ -0.35
POLE-222	ENST00000545015	PCDHGB7	Q9Y5F8	929 aa		12.84	□□□□□ -0.35
POLE-222	ENST00000545015	IGKV1-8	A0A0C4DH67	115 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms