RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 STRA8Q7Z7C7 330 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 SLC26A11Q86WA9 606 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 MCATQ8IVS2 390 aaKnown RBP15.12■□□□□ 0.01
CCDC78-216ENST00000544996 SYTL1Q8IYJ3 562 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 MYO1HQ8N1T3 1032 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 OR2L3Q8NG85 312 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 OR2A1Q8NGT9 310 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 FAM45AQ8TCE6 357 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 MCOLN3Q8TDD5 553 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 EEF1AKMT1Q8WVE0 214 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 CDKL2Q92772 493 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 TRIM44Q96DX7 344 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-216ENST00000544996 MIPEPQ99797 713 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 SPRTNQ9H040 489 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-216ENST00000544996 CHST8Q9H2A9 424 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 AKIRIN1Q9H9L7 192 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-216ENST00000544996 PCMTD2Q9NV79 361 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 EURLQ9NYK6 297 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 MOCS1Q9NZB8 636 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 GRHL1Q9NZI5 618 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 SLC17A6Q9P2U8 582 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 SRPK3Q9UPE1 567 aa15.12■□□□□ 0.01
CCDC78-216ENST00000544996 PABPN1LA6NDY0 278 aaKnown RBP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 C9J4A7 227 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 HCRTR1O43613 425 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 SFTPCP11686 197 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 PSMB5P28074 263 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 PTPN4P29074 926 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 GRIA3P42263 894 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 IL2P60568 153 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 TIAL1Q01085 375 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 ILF2Q12905 390 aaKnown RBP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 SP140Q13342 867 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 LY6DQ14210 128 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 ERV3-1Q14264 604 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 FASTKQ14296 549 aaKnown RBP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 LINC00303Q3SY05 128 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 FCRL6Q6DN72 434 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 C8orf74Q6P047 294 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 SUSD1Q6UWL2 747 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 CAPN12Q6ZSI9 719 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 ZNF655Q8N720 491 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 MED8Q96G25 268 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 C17orf62Q9BQA9 187 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 NDC1Q9BTX1 674 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 ACAT2Q9BWD1 397 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 ACTL8Q9H568 366 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 TXLNGQ9NUQ3 528 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 UTP6Q9NYH9 597 aaKnown RBP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 TXNDC16Q9P2K2 825 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 FARSAQ9Y285 508 aaKnown RBP15.11■□□□□ 0.01
CCDC78-216ENST00000544996 KLK4Q9Y5K2 254 aa15.11■□□□□ 0.01
CCDC78-216ENST00000544996 A0A1W2PPV9 198 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 E7ENX8 843 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 SLC16A5O15375 505 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 CCNDBP1O95273 360 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 RAB40ALP0C0E4 278 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 HIST1H2AGP0C0S8 130 aaPredicted RBP15.1■□□□□ 0.01
CCDC78-216ENST00000544996 HIST1H2ADP20671 130 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 FDXRP22570 491 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 TAP2Q03519 686 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 DEFB109BQ30KR1 87 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 PTCHD3Q3KNS1 767 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 RHBDD2Q6NTF9 364 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 SYVN1Q86TM6 617 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 MNS1Q8NEH6 495 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 PROKR1Q8TCW9 393 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 ZNF480Q8WV37 535 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 DLG3Q92796 817 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 LINGO1Q96FE5 620 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 HIST1H2AHQ96KK5 128 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 CCDC138Q96M89 665 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 HIST1H2AJQ99878 128 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 SELENOSQ9BQE4 189 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 H2AFJQ9BTM1 129 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 NLNQ9BYT8 704 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 PHACTR1Q9C0D0 580 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 PARVBQ9HBI1 364 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 MRPS30Q9NP92 439 aaKnown RBP15.1■□□□□ 0.01
CCDC78-216ENST00000544996 IGSF10Q6WRI0 2623 aa15.1■□□□□ 0.01
CCDC78-216ENST00000544996 CDC14CA4D256 554 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 H3BMH7 237 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 SRPX2O60687 465 aaPredicted RBP15.09■□□□□ 0.01
CCDC78-216ENST00000544996 PRB1P04280 392 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 GSTA2P09210 222 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 FAM87AP0C7U9 286 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 SAT1P21673 171 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 SSTR1P30872 391 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 ARSFP54793 590 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 DCDP81605 110 aaKnown RBP15.09■□□□□ 0.01
CCDC78-216ENST00000544996 PRDX1Q06830 199 aaKnown RBP15.09■□□□□ 0.01
CCDC78-216ENST00000544996 C19orf57Q0VDD7 668 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 GRM7Q14831 915 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 THEMIS2Q5TEJ8 643 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 YOD1Q5VVQ6 348 aaPredicted RBP15.09■□□□□ 0.01
CCDC78-216ENST00000544996 C3orf62Q6ZUJ4 267 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 ZC3HC1Q86WB0 502 aaKnown RBP15.09■□□□□ 0.01
CCDC78-216ENST00000544996 CCDC25Q86WR0 208 aa15.09■□□□□ 0.01
CCDC78-216ENST00000544996 SPNS2Q8IVW8 549 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms