RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 KCNC1P48547 511 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 HYAL1Q12794 435 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 RALGDSQ12967 914 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 CLCA4Q14CN2 919 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TCEA2Q15560 299 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TEAD4Q15561 434 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TBCEQ15813 527 aaPredicted RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 CYP51A1Q16850 503 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 FAM98BQ52LJ0 330 aaKnown RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 GPAT3Q53EU6 434 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 C2orf27AQ580R0 203 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TJAP1Q5JTD0 557 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 CATSPEREQ5SY80 951 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TPRG1LQ5T0D9 272 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TMEM198Q66K66 360 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 ZNF470Q6ECI4 717 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 LAIR2Q6ISS4 152 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 CYP2R1Q6VVX0 501 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 ZNF517Q6ZMY9 492 aaPredicted RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 CCDC149Q6ZUS6 474 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 GALNTL5Q7Z4T8 443 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TMCO2Q7Z6W1 182 aaPredicted RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 OR5H6Q8NGV6 325 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 RNF139Q8WU17 664 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 DNAJA4Q8WW22 397 aaPredicted RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 LRRC58Q96CX6 371 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 ZHX1-C8orf76Q96EF9 292 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 ZC3HAV1LQ96H79 300 aaKnown RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 ZNF845Q96IR2 970 aaPredicted RBP5.14□□□□□ -1.59
USP28-213ENST00000544967 MAP6Q96JE9 813 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 NSMCE2Q96MF7 247 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 GPR78Q96P69 363 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 PPP1R2P1Q96PQ5 205 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 PEBP4Q96S96 227 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TTLL2Q9BWV7 592 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 CALN1Q9BXU9 219 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 GPR62Q9BZJ7 368 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 ASAH2Q9NR71 780 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 PLCXD1Q9NUJ7 323 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 CMTM6Q9NX76 183 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TAS2R9Q9NYW1 312 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 CLEC1BQ9P126 229 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 STUB1Q9UNE7 303 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 GPR34Q9UPC5 381 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 AURKCQ9UQB9 309 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 BTBD3Q9Y2F9 522 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 PCDHGA10Q9Y5H3 936 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 KLK4Q9Y5K2 254 aa5.14□□□□□ -1.59
USP28-213ENST00000544967 TRAV6A0A075B6T7 132 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ZCWPW2A0A1B0GU75 182 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 A0A1W2PP18 115 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 A8MVJ9 347 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 H7C4K7 107 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 FRS3O43559 492 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 DLX3O60479 287 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 FTH1P02794 183 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SERPINF2P08697 491 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GGT5P36269 586 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PPP3CCP48454 512 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PXNP49023 591 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 ACOT2P49753 483 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 TAF6P49848 677 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GZMKP49863 264 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 EMX2Q04743 252 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CD47Q08722 323 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 C17orf67Q0P5P2 114 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 GPM6BQ13491 265 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ASAH1Q13510 395 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RIN1Q13671 783 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SWI5Q1ZZU3 235 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SOWAHAQ2M3V2 549 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PPM1JQ5JR12 505 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 INTS6LQ5JSJ4 861 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 RTP2Q5QGT7 225 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 SNAP47Q5SQN1 464 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 LDLRAP1Q5SW96 308 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ARHGAP17Q68EM7 881 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HEATR6Q6AI08 1181 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 PAGE2Q7Z2X7 111 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HIPK1Q86Z02 1210 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ZDHHC13Q8IUH4 622 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 FUNDC1Q8IVP5 155 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 RDH10Q8IZV5 341 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 MIER2Q8N344 545 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PARP16Q8N5Y8 322 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 OR5K1Q8NHB7 308 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PCDH19Q8TAB3 1148 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 HTR3CQ8WXA8 447 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 CIDECQ96AQ7 238 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 ISG20Q96AZ6 181 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 VPS39Q96JC1 886 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ZNF668Q96K58 619 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 MAGEB10Q96LZ2 347 aaPredicted RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 ITPAQ9BY32 194 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 DCSTAMPQ9H295 470 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 ABCB10Q9NRK6 738 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 IARS2Q9NSE4 1012 aaKnown RBP5.13□□□□□ -1.59
USP28-213ENST00000544967 TRHDEQ9UKU6 1024 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 PSAT1Q9Y617 370 aa5.13□□□□□ -1.59
USP28-213ENST00000544967 A0A0G2JMP0 313 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms