RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 A0A0J9YY10 115 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TK2O00142 265 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TOX3O15405 576 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HYAL3O43820 417 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SMIM24O75264 130 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CMPK1P30085 196 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCKBRP32239 447 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ARL4DP49703 201 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SLC18A2Q05940 514 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TARDBPQ13148 414 aaKnown RBP eCLIP13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 C18orf21Q32NC0 220 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FBXO48Q5FWF7 155 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMPRSS7Q7RTY8 843 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PRSS42Q7Z5A4 293 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FAM20CQ8IXL6 584 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PDPRQ8NCN5 879 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 OR56A3Q8NH54 315 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PGM2Q96G03 612 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 KLHL25Q9H0H3 589 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CNOT10Q9H9A5 744 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 C1GALT1Q9NS00 363 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 AKAP7Q9P0M2 348 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SENP1Q9P0U3 644 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PDP2Q9P2J9 529 aa13.97□□□□□ -0.17
TNFRSF1A-216ENST00000543995 IGHV5-51A0A0C4DH38 117 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SLC9B1P1A6NJY1 282 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MAP2K7O14733 419 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MAP3K7O43318 606 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PRICKLE3O43900 615 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SPAG7O75391 227 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCNDBP1O95273 360 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MTHFD2P13995 350 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PVRP15151 417 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CSTF2P33240 577 aaKnown RBP eCLIP13.96□□□□□ -0.177e-7■□□□□ 8.4
TNFRSF1A-216ENST00000543995 CRHR1P34998 444 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HSPA7P48741 367 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PFKFB4Q16877 469 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ZXDCQ2QGD7 858 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PTCHD3Q3KNS1 767 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PRAMEF13Q5VWM6 474 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CARFQ8N187 725 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CACTIN-AS1Q8N1I8 211 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FBXO39Q8N4B4 442 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCDC63Q8NA47 563 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 OR2L3Q8NG85 312 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 OR2A1Q8NGT9 310 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FLVCR1-AS1Q8TAF5 88 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ESAMQ96AP7 390 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 APOPT1Q96IL0 206 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CMKLR1Q99788 373 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TWSG1Q9GZX9 223 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PCBD2Q9H0N5 130 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ZNF768Q9H5H4 540 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 VIPAS39Q9H9C1 493 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MRPS30Q9NP92 439 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 INTS7Q9NVH2 962 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMCO1Q9UM00 188 aa13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SNRNP200O75643 2136 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HGSO14964 777 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TAPBPO15533 448 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 WDR47O94967 919 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FKBP9O95302 570 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ST6GAL1P15907 406 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TAC1P20366 129 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GDF5P43026 501 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 LSSP48449 732 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ALDH18A1P54886 795 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 C16orf72Q14CZ0 275 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KIAA1614Q5VZ46 1190 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ICE2Q659A1 982 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CDHR3Q6ZTQ4 885 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ARHGAP22Q7Z5H3 698 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 THOC6Q86W42 341 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MARCH9Q86YJ5 346 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GOLGA6L1Q8N7Z2 621 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 BANPQ8N9N5 519 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 AGBL5Q8NDL9 886 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GRAMD1AQ96CP6 724 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PHF21BQ96EK2 531 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TMEM79Q9BSE2 394 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 HAUS8Q9BT25 410 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SGPP1Q9BX95 441 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PITPNM3Q9BZ71 974 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PTBP2Q9UKA9 531 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC22A14Q9Y267 594 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 KLHL20Q9Y2M5 609 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CCNT2O60583 730 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 STK16O75716 305 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ZBTB11O95625 1053 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CREB1P16220 341 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MAGP20916 626 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ABATP80404 500 aa13.95□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PRDX1Q06830 199 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms