RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 FAM45AQ8TCE6 357 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 CD200R1Q8TD46 325 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 FKBP10Q96AY3 582 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 HIST1H2AHQ96KK5 128 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 IL17FQ96PD4 163 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 GPR21Q99679 349 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 HIST1H2AJQ99878 128 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 SELENOSQ9BQE4 189 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 H2AFJQ9BTM1 129 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 TRIM54Q9BYV2 358 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 MRPS30Q9NP92 439 aaKnown RBP9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 PPANQ9NQ55 473 aaKnown RBP9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 ACSS2Q9NR19 701 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 IFT80Q9P2H3 777 aaPredicted RBP9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 NXT1Q9UKK6 140 aaKnown RBP9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 MRPS18BQ9Y676 258 aaKnown RBP9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 ZZEF1O43149 2961 aa9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 DSPP15924 2871 aaKnown RBP9.88□□□□□ -0.83
NPIPB4-217ENST00000543449 A0A1B0GX78 115 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 FITM1A5D6W6 292 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ARHGEF33A8MVX0 844 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 H3BMH7 237 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 J3QKU1 62 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 PEX12O00623 359 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 TTI1O43156 1089 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 HAUS5O94927 633 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ONECUT2O95948 504 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 TUBB4AP04350 444 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ERVK-10P10266 1014 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 FOLR3P41439 243 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ELK3P41970 407 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 IL2P60568 153 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 MPP1Q00013 466 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 CAV1Q03135 178 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 PRDX1Q06830 199 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 CKAP4Q07065 602 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 PDAP1Q13442 181 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ZNF385CQ66K41 422 aaPredicted RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 STEAP4Q687X5 459 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 PRMT9Q6P2P2 845 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ZNF549Q6P9A3 640 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 FAM198BQ6UWH4 519 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 TAX1BP1Q86VP1 789 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 SLC26A11Q86WA9 606 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 AGGF1Q8N302 714 aaeCLIP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ZNF655Q8N720 491 aaPredicted RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 SLC38A9Q8NBW4 561 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 OR2A1Q8NGT9 310 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 CDKL2Q92772 493 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 FAM136AQ96C01 138 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 FER1L6-AS2Q96M78 137 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 CCDC138Q96M89 665 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ZNF285Q96NJ3 590 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 GBP5Q96PP8 586 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 KRT12Q99456 494 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 MIPEPQ99797 713 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ZFYVE21Q9BQ24 234 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 TRIM56Q9BRZ2 755 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 FAM129AQ9BZQ8 928 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 SEMA4CQ9C0C4 833 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 PHACTR1Q9C0D0 580 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 SPRTNQ9H040 489 aaPredicted RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 RAB17Q9H0T7 212 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 WHRNQ9P202 907 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 ZFATQ9P243 1243 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 CDC14AQ9UNH5 594 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 UTP11Q9Y3A2 253 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 PCDHGA9Q9Y5G4 932 aaKnown RBP9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 TEX264Q9Y6I9 313 aa9.87□□□□□ -0.83
NPIPB4-217ENST00000543449 OR2A25A4D2G3 310 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 E7ESA3 106 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 DSCR3O14972 297 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 SLC28A2O43868 658 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 SYF2O95926 243 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 ENO2P09104 434 aaPredicted RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 GSTA2P09210 222 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 PLA2G2AP14555 144 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 EZRP15311 586 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 CARSP49589 748 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 AP1S2P56377 157 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 MGAT5Q09328 741 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 MUM1Q2TAK8 710 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 DEFB110Q30KQ9 67 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 PTCHD3Q3KNS1 767 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 NKAIN1Q4KMZ8 207 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 TEDDM1Q5T9Z0 273 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 THEMIS2Q5TEJ8 643 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 PRAMEF17Q5VTA0 474 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 GARNL3Q5VVW2 1013 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 MLIPQ5VWP3 458 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 FCRL6Q6DN72 434 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 CYHR1Q6ZMK1 362 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 UBE2R2Q712K3 238 aaPredicted RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 RNF44Q7L0R7 432 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 CPNE9Q8IYJ1 553 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 C2orf73Q8N5S3 287 aaPredicted RBP9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 SPATA4Q8NEY3 305 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 OR2Y1Q8NGV0 311 aa9.86□□□□□ -0.83
NPIPB4-217ENST00000543449 ATL1Q8WXF7 558 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms