RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SRPRAP08240 638 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SPARCP09486 303 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CBSLP0DN79 551 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 IL7RP16871 459 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CSNK2A2P19784 350 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CBSP35520 551 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 BCAP31P51572 246 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CLCN7P51798 805 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RPS14P62263 151 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 OGDHQ02218 1023 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SIM2Q14190 667 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SGCBQ16585 318 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 DPY19L1Q2PZI1 675 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TBC1D25Q3MII6 688 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC9A4Q6AI14 798 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RPTNQ6XPR3 784 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 DCAKDQ8WVC6 231 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC35G5Q96KT7 338 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TBL1XR1Q9BZK7 514 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 IGSF5Q9NSI5 407 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ADGRE2Q9UHX3 823 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 STON1Q9Y6Q2 735 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 A8MUA0 341 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 DCLK1O15075 740 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TLX3O43711 291 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 BEST1O76090 585 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PGLSO95336 258 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 CLEC3BP05452 202 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC7A1P30825 629 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PREPP48147 710 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 NOVP48745 357 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PLGLB1Q02325 96 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM115Q12893 351 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 NRF1Q16656 503 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM214AQ32MH5 1076 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ARMCX4Q5H9R4 360 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ALYREFQ86V81 257 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 RANBP3LQ86VV4 465 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ZDHHC12Q96GR4 267 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 DGAT2Q96PD7 388 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 FARSBQ9NSD9 589 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 ZCCHC3Q9NUD5 404 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 HRASLS2Q9NWW9 162 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 SLCO3A1Q9UIG8 710 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 PRPF19Q9UMS4 504 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 TMED5Q9Y3A6 229 aa6.74□□□□□ -1.33
SRGAP1-206ENST00000543397 DUXAA6NLW8 204 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PLGP00747 810 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 IFNW1P05000 195 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 JUNDP17535 347 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CCNA2P20248 432 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 GRIA1P42261 906 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CARTPTQ16568 116 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 EMC10Q5UCC4 262 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC8B1Q6J4K2 584 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC29A4Q7RTT9 530 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 GOT1L1Q8NHS2 421 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 HLA-CQ95604 372 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CMTM7Q96FZ5 175 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ART5Q96L15 291 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 NPAS2Q99743 824 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 REXO4Q9GZR2 422 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC32A1Q9H598 525 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 OBP2AQ9NY56 170 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 APOBEC3BQ9UH17 382 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 WWP2O00308 870 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SAP18O00422 153 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 MAP2K7O14733 419 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 UNC5CO95185 931 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 TGFB1P01137 390 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CYP11A1P05108 521 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CD247P20963 164 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 DRD1P21728 446 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SHMT2P34897 504 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 BDKRB1P46663 353 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CST6Q15828 149 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 NEDD8Q15843 81 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CYP1B1Q16678 543 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 RFX4Q33E94 735 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 METTL21CQ5VZV1 264 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM180AQ6UWF9 173 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ANKRD46Q86W74 232 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 UMODL1-AS1Q8N2C9 162 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 NXPE1Q8N323 547 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 FBXW8Q8N3Y1 598 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 C19orf18Q8NEA5 215 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PJA1Q8NG27 643 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SCAMP4Q969E2 229 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC38A4Q969I6 547 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 MYRFQ9Y2G1 1151 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 AK5Q9Y6K8 562 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 CENPXA8MT69 81 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 MAGEB17A8MXT2 336 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 M0QZQ0 153 aa6.73□□□□□ -1.33
SRGAP1-206ENST00000543397 PIP5K1BO14986 540 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms