RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ROPN1BQ9BZX4 212 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 KLHL25Q9H0H3 589 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ATG10Q9H0Y0 220 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ALG9Q9H6U8 611 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ROPN1Q9HAT0 212 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 CCDC177Q9NQR7 707 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 SOHLH2Q9NX45 425 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 AK5Q9Y6K8 562 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ANKRD12Q6UB98 2062 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 CEP295Q9C0D2 2601 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 CTIFO43310 598 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 MAP3K7O43318 606 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 TNFSF15O95150 251 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 CCND1P24385 295 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 CMPK1P30085 196 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 KCNC1P48547 511 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 HNMTP50135 292 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 TBPL1P62380 186 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 SH3BP2P78314 561 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 NAE1Q13564 534 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 ZXDCQ2QGD7 858 aaPredicted RBP16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 TMTC4Q5T4D3 741 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 KIAA1614Q5VZ46 1190 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 KLC3Q6P597 504 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 CLEC14AQ86T13 490 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 RIBC1Q8N443 379 aaPredicted RBP16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 C19orf47Q8N9M1 422 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 OR56A3Q8NH54 315 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 RHEBL1Q8TAI7 183 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 ACMSDQ8TDX5 336 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 SLC46A1Q96NT5 459 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 ATOH8Q96SQ7 321 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 MIPEPQ99797 713 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 EGFL8Q99944 293 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 ACAT2Q9BWD1 397 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 SGPP1Q9BX95 441 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 TMEM121BQ9BXQ6 578 aaPredicted RBP16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 CHRNA10Q9GZZ6 450 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 PCBD2Q9H0N5 130 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 PDE7BQ9NP56 450 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 FBXO8Q9NRD0 319 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 INTS7Q9NVH2 962 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 TAC3Q9UHF0 121 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 RNF112Q9ULX5 631 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 PLAAQ9Y263 795 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 AKAP13Q12802 2813 aa16.48■□□□□ 0.23
RABGGTA-203ENST00000543002 TLDC2A0PJX2 215 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 KERAO60938 352 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 CCNDBP1O95273 360 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 MT-ND3P03897 115 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 EBLN1P0CF75 366 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 FOLR1P15328 257 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 MAGP20916 626 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 RBMS1P29558 406 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 GRIA3P42263 894 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 GLRBP48167 497 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 MAPK10P53779 464 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 ABATP80404 500 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 PRDX1Q06830 199 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 KCNAB1Q14722 419 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 ZIC1Q15915 447 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 THEMIS2Q5TEJ8 643 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 ICE2Q659A1 982 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 CAPN13Q6MZZ7 669 aaPredicted RBP16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 CYP4X1Q8N118 509 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 RHBDF1Q96CC6 855 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 MED8Q96G25 268 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 TCTN2Q96GX1 697 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 TAAR9Q96RI9 348 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 TMEM109Q9BVC6 243 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 B3GNT4Q9C0J1 378 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 ASCL3Q9NQ33 180 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 SLC39A1Q9NY26 324 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 KLK4Q9Y5K2 254 aa16.47■□□□□ 0.23
RABGGTA-203ENST00000543002 TARM1B6A8C7 271 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 BRINP1O60477 761 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 PRAMEF10O60809 474 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 MSL3P1P0C860 447 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 RAB15P59190 212 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 YBX1P67809 324 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 ACY1Q03154 408 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 FOXM1Q08050 763 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 CYP4F3Q08477 520 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 NAA25Q14CX7 972 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 PRAMEF13Q5VWM6 474 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 CYB5D1Q6P9G0 228 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 FIGLAQ6QHK4 219 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 LCTLQ6UWM7 567 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 LCA5Q86VQ0 697 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 TCAIMQ8N3R3 496 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 PDPRQ8NCN5 879 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 HNRNPLLQ8WVV9 542 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 USP7Q93009 1102 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 ZUFSPQ96AP4 578 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 ALKBH8Q96BT7 664 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 PYCR2Q96C36 320 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 TSNARE1Q96NA8 513 aa16.46■□□□□ 0.23
RABGGTA-203ENST00000543002 OR6C1Q96RD1 312 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms