RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 KCNJ13O60928 360 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 PDE9AO76083 593 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 BMP10O95393 424 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 FGFR1OPO95684 399 aaKnown RBP4.55□□□□□ -1.68
LIMS1-214ENST00000542845 CYP1A1P04798 512 aaPredicted RBP4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SERPINA7P05543 415 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 PSMA2P25787 234 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 AKT1P31749 480 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 CD86P42081 329 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 KIR2DL3P43628 341 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ARSEP51690 589 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 AIF1P55008 147 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ETF1P62495 437 aaKnown RBP4.55□□□□□ -1.68
LIMS1-214ENST00000542845 OC90Q02509 493 aaPredicted RBP4.55□□□□□ -1.68
LIMS1-214ENST00000542845 OCA2Q04671 838 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 TFF3Q07654 80 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 KLC1Q07866 573 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 PKP1Q13835 747 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 IHHQ14623 411 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 PCBP2Q15366 365 aaKnown RBP eCLIP4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SYCP1Q15431 976 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ZIC1Q15915 447 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SLC5A12Q1EHB4 618 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ATP13A5Q4VNC0 1218 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 VWA3BQ502W6 1294 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 CT47A1Q5JQC4 288 aaPredicted RBP4.55□□□□□ -1.68
LIMS1-214ENST00000542845 XP32Q5T750 250 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 METRNLQ641Q3 311 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SPINK14Q6IE38 97 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 TLDC1Q6P9B6 456 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SPESP1Q6UW49 350 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ARSKQ6UWY0 536 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 NAPRTQ6XQN6 538 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 NDUFAF7Q7L592 441 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 NT5DC3Q86UY8 548 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 AMIGO1Q86WK6 493 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 RPRMLQ8N4K4 120 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 MARVELD2Q8N4S9 558 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 DTWD1Q8N5C7 304 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SIMC1Q8NDZ2 872 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ACVR1CQ8NER5 493 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 BRSK1Q8TDC3 778 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 TMEM158Q8WZ71 300 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 HSPH1Q92598 858 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 DLG3Q92796 817 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 HDAC10Q969S8 669 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 PPP1R14AQ96A00 147 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 MIEF2Q96C03 454 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 SIGLEC12Q96PQ1 595 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ADAM19Q9H013 955 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 ZWILCHQ9H900 591 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 WDR54Q9H977 334 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 REV1Q9UBZ9 1251 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 TRPS1Q9UHF7 1281 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 C3orf18Q9UK00 162 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 MAN1B1Q9UKM7 699 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 TMPRSS11EQ9UL52 423 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 KLHL20Q9Y2M5 609 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 CORINQ9Y5Q5 1042 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 JMJD1CQ15652 2540 aa4.55□□□□□ -1.68
LIMS1-214ENST00000542845 AKAP6Q13023 2319 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 FAM237AA0A1B0GTK4 181 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 A0A1B0GX78 115 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ISM1B1AKI9 464 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 H3BMH7 237 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 FFAR3O14843 346 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 DSCR3O14972 297 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 GPR42O15529 346 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 GPR39O43194 453 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ARHGEF9O43307 516 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 BUD23O43709 281 aaKnown RBP4.54□□□□□ -1.68
LIMS1-214ENST00000542845 EIF4EBP3O60516 100 aaPredicted RBP4.54□□□□□ -1.68
LIMS1-214ENST00000542845 RNF8O76064 485 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ZRANB2O95218 330 aaKnown RBP eCLIP4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ATE1O95260 518 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ALBP02768 609 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 S100BP04271 92 aaPredicted RBP4.54□□□□□ -1.68
LIMS1-214ENST00000542845 CALB1P05937 261 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 PGRP06401 933 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ZGLP1P0C6A0 271 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 MSL3P1P0C860 447 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 UGT2B7P16662 529 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 CHRNB2P17787 502 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 MSH3P20585 1137 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 MCM3P25205 808 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 NDUFS1P28331 727 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 UQCRC1P31930 480 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 PTGER1P34995 402 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 PTGS2P35354 604 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ARL4AP40617 200 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 RFC3P40938 356 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 PPP1R2P41236 205 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 GRIA3P42263 894 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 CARSP49589 748 aaKnown RBP4.54□□□□□ -1.68
LIMS1-214ENST00000542845 ARSFP54793 590 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 GYS2P54840 703 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 EMP2P54851 167 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 DLX5P56178 289 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 NUP107P57740 925 aa4.54□□□□□ -1.68
LIMS1-214ENST00000542845 FMO1Q01740 532 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms