RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SLC6A19Q695T7 634 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 TTLL10Q6ZVT0 673 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 NEK10Q6ZWH5 1172 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 OVCH1Q7RTY7 1134 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 PPP1R32Q7Z5V6 425 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 GALNT16Q8N428 558 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 C2orf73Q8N5S3 287 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-206ENST00000542310 RBMXL3Q8N7X1 1067 aaKnown RBP14.98□□□□□ -0.01
VPS33A-206ENST00000542310 Q8NA96 180 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 MCUQ8NE86 351 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 PBKQ96KB5 322 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 FAM114A2Q9NRY5 505 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 KLHL42Q9P2K6 505 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 JRKLQ9Y4A0 524 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 DOCK10Q96BY6 2186 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 RP1L1Q8IWN7 2480 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-206ENST00000542310 A0A1W2PPV9 198 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 MAGEB16A2A368 324 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 E5RI56 91 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 AGPSO00116 658 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 MYO1CO00159 1063 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 PSIP1O75475 530 aaKnown RBP14.97□□□□□ -0.01
VPS33A-206ENST00000542310 KRT14P02533 472 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 PKMP14618 531 aaKnown RBP14.97□□□□□ -0.01
VPS33A-206ENST00000542310 MMP11P24347 488 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 PSMB5P28074 263 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 VPS41P49754 854 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 ESPL1Q14674 2120 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 SLC9A5Q14940 896 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 FAM214AQ32MH5 1076 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 TTLL9Q3SXZ7 439 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 CCSMST1Q4G0I0 132 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 NEPROQ6NW34 567 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 CASC4Q6P4E1 433 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 CES3Q6UWW8 571 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 IGFL3Q6UXB1 125 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 CENPUQ71F23 418 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 COX15Q7KZN9 410 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 CAND1Q86VP6 1230 aaKnown RBP14.97□□□□□ -0.01
VPS33A-206ENST00000542310 LMNTD2Q8IXW0 634 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 OR2A1Q8NGT9 310 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 TM9SF4Q92544 642 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 SPSB2Q99619 263 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 SLC29A3Q9BZD2 475 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 SLAMF7Q9NQ25 335 aa14.97□□□□□ -0.01
VPS33A-206ENST00000542310 RUVBL2Q9Y230 463 aaKnown RBP14.97□□□□□ -0.01
VPS33A-206ENST00000542310 USP9XQ93008 2570 aaPredicted RBP14.97□□□□□ -0.01
VPS33A-206ENST00000542310 MAST4O15021 2626 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 OR2A25A4D2G3 310 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 A6NL46 340 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ZNF839A8K0R7 811 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ARHGEF33A8MVX0 844 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 GOLGA8KD6RF30 607 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 GOLGA8TH3BQL2 631 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 CTSVO60911 334 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 CATP04040 527 aaKnown RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 CHRM3P20309 590 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ALAS2P22557 587 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 CMPK1P30085 196 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 HSD17B2P37059 387 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 MAGEA3P43357 314 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 EMP3P54852 163 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 AIMP2Q13155 320 aaKnown RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 DHX34Q14147 1143 aaKnown RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 TRIP13Q15645 432 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 NKG7Q16617 165 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ANKRD20A4Q4UJ75 823 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ANKRD22Q5VYY1 191 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ZNF470Q6ECI4 717 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 PRMT9Q6P2P2 845 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 TTC27Q6P3X3 843 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 FBXO15Q8NCQ5 510 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 OR9A1PQ8NGU1 263 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 KCNJ9Q92806 393 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 MAGOHBQ96A72 148 aaKnown RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 ZNF669Q96BR6 464 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-206ENST00000542310 VPS50Q96JG6 964 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 SERPINB12Q96P63 405 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 MIPEPQ99797 713 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 CRYL1Q9Y2S2 319 aa14.96□□□□□ -0.01
VPS33A-206ENST00000542310 SDR42E2A6NKP2 422 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 PGRMC1O00264 195 aaKnown RBP14.95□□□□□ -0.02
VPS33A-206ENST00000542310 AVILO75366 819 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 VPS26AO75436 327 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 USP1O94782 785 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 CCNDBP1O95273 360 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 ENO3P13929 434 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-206ENST00000542310 MCM3P25205 808 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 FNTAP49354 379 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 CLCN7P51798 805 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 VSX2P58304 361 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-206ENST00000542310 INPP5JQ15735 1006 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-206ENST00000542310 KLHL38Q2WGJ6 581 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 CALML6Q8TD86 181 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 GRK7Q8WTQ7 553 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 SMPDL3AQ92484 453 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 ZFYVE21Q9BQ24 234 aa14.95□□□□□ -0.02
VPS33A-206ENST00000542310 ZNF552Q9H707 407 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-206ENST00000542310 ATP13A2Q9NQ11 1180 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms