RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TRIM10Q9UDY6 481 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 NDOR1Q9UHB4 597 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 FBXL4Q9UKA2 621 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 MAN1B1Q9UKM7 699 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 RPL26L1Q9UNX3 145 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 WDR37Q9Y2I8 494 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 RPH3AQ9Y2J0 694 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 AP1M2Q9Y6Q5 423 aa4.44□□□□□ -1.7
SNHG1-214ENST00000540865 FBN1P35555 2871 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 PRRC2AP48634 2157 aaKnown RBP4.44□□□□□ -1.7
SNHG1-214ENST00000540865 ZGRF1Q86YA3 2104 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TRAV17A0A0B4J275 112 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 C1orf232A0A0U1RR37 186 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 MYOCOSA0A1B0GUC4 107 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 DYTNA2CJ06 578 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 OR6C74A6NCV1 312 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FOXO6A8MYZ6 492 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 MATN2O00339 956 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 SLC19A2O60779 497 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PMPCBO75439 489 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PRLP01236 227 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CALB1P05937 261 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 MTHFD1P11586 935 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 UNGP13051 313 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CDH3P22223 829 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CA4P22748 312 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 MMP11P24347 488 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 MMP13P45452 471 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 NSFP46459 744 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TNFSF10P50591 281 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 KPNA2P52292 529 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 IST1P53990 364 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CDH6P55285 790 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 DCDC1P59894 354 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FMO1Q01740 532 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CDR2Q01850 454 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FOLH1Q04609 750 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 DMPKQ09013 629 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FOXD4Q12950 439 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PRKAA1Q13131 559 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 DPYSQ14117 519 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CDSNQ15517 529 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 C3AR1Q16581 482 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CA9Q16790 459 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 ERMARDQ5T6L9 678 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 KLHDC7AQ5VTJ3 777 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 ISM2Q6H9L7 571 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 RHBDD2Q6NTF9 364 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 DPY19L2P1Q6NXN4 242 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FBXO38Q6PIJ6 1188 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 C11orf96Q7Z7L8 435 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 BIVMQ86UB2 503 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PHF13Q86YI8 300 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 LRRC49Q8IUZ0 686 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PSTKQ8IV42 348 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 GPR135Q8IZ08 494 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TRAM1L1Q8N609 369 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TEX26Q8N6G2 289 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CATSPER1Q8NEC5 780 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 SLC30A5Q8TAD4 765 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 VPS50Q96JG6 964 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PPM1MQ96MI6 270 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TIGD1Q96MW7 591 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CLUHP3Q96NS8 147 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 NDC1Q9BTX1 674 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 NUP85Q9BW27 656 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 JAM3Q9BX67 310 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 SGPP1Q9BX95 441 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 SPATA16Q9BXB7 569 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TDRD1Q9BXT4 1180 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 STK33Q9BYT3 514 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PITPNM3Q9BZ71 974 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 XPO4Q9C0E2 1151 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 POLR1EQ9GZS1 481 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 VPS16Q9H269 839 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CDIP1Q9H305 208 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 EPB41L4BQ9H329 900 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FANCLQ9NW38 375 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 SLC24A2Q9UI40 661 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 SH3BGRL2Q9UJC5 107 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 NOCTQ9UK39 431 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 POMT2Q9UKY4 750 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 CHKBQ9Y259 395 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 PCDHA9Q9Y5H5 950 aa4.43□□□□□ -1.7
SNHG1-214ENST00000540865 FN1P02751 2386 aaKnown RBP4.43□□□□□ -1.7
SNHG1-214ENST00000540865 TCRBV5S1A1TA0A578 114 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 GSAPA4D1B5 854 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 ANKRD66B4E2M5 251 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 F8VZ95 297 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 H3BMH7 237 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 SOCS6O14544 535 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 PRPSAP2O60256 369 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CNOT3O75175 753 aaKnown RBP4.42□□□□□ -1.7
SNHG1-214ENST00000540865 MTX2O75431 263 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 RASAL1O95294 804 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 UCHL3P15374 230 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 CHRNB2P17787 502 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 IGFBP2P18065 325 aa4.42□□□□□ -1.7
SNHG1-214ENST00000540865 POLR2CP19387 275 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms