RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 EPHA4P54764 986 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 HERVK_113P63132 956 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 HHEXQ03014 270 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 GALNT1Q10472 559 aaPredicted RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 SF3A3Q12874 501 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATL3-204ENST00000540699 SETDB1Q15047 1291 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 CLPPQ16740 277 aaPredicted RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 ARL13AQ5H913 290 aaPredicted RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 CDCP2Q5VXM1 449 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 SPRED1Q7Z699 444 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 PROSER1Q86XN7 944 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 GPSM1Q86YR5 675 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 SLC22A15Q8IZD6 547 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 FBXO39Q8N4B4 442 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 PDPRQ8NCN5 879 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 SPDYE1Q8NFV5 336 aaPredicted RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 WDR48Q8TAF3 677 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 PIWIL2Q8TC59 973 aaKnown RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 ZFPM2Q8WW38 1151 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 EXT2Q93063 718 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 SH3KBP1Q96B97 665 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 THOC1Q96FV9 657 aaKnown RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 CNDP1Q96KN2 507 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 INSM2Q96T92 566 aaPredicted RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 CCDC3Q9BQI4 270 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 ERVK-6Q9BXR3 956 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 TRIM55Q9BYV6 548 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 STN1Q9H668 368 aaKnown RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 ACSS2Q9NR19 701 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 PNPOQ9NVS9 261 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 PSMD13Q9UNM6 376 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 ARL2BPQ9Y2Y0 163 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 RAP2CQ9Y3L5 183 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 HEBP2Q9Y5Z4 205 aa10.28□□□□□ -0.76
ATL3-204ENST00000540699 SNRNP200O75643 2136 aaKnown RBP10.28□□□□□ -0.76
ATL3-204ENST00000540699 TRBV23OR9-2A0A075B6M9 112 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 LRRC14BA6NHZ5 514 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 RHPN2P1A8MT19 583 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 GFYI3L273 518 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 SLC16A5O15375 505 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 B4GAT1O43505 415 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 SIX3O95343 332 aaPredicted RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 MATN4O95460 622 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 HSPA4LO95757 839 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 C8GP07360 202 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 ENO2P09104 434 aaPredicted RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 GFAPP14136 432 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 NDUFS1P28331 727 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 PREPP48147 710 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 ALDH18A1P54886 795 aaKnown RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 NAA20P61599 178 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 CDKL1Q00532 357 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 HSPA14Q0VDF9 509 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 PRKAA1Q13131 559 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 SP140Q13342 867 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 BOP1Q14137 746 aaKnown RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 PHKG1Q16816 387 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 PFKFB4Q16877 469 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 CDKL4Q5MAI5 379 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 TMEM26Q6ZUK4 368 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 RPS27LQ71UM5 84 aaKnown RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 MAVSQ7Z434 540 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 CCNYL1Q8N7R7 359 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 ZNF781Q8N8C0 355 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 PPP4R1Q8TF05 950 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 ZNF483Q8TF39 744 aaPredicted RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 UBTD2Q8WUN7 234 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 ASB11Q8WXH4 323 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 TMEM159Q96B96 161 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 CXorf40BQ96DE9 158 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 C12orf66Q96MD2 445 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 PLCD4Q9BRC7 762 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 SIKE1Q9BRV8 207 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 TRMOQ9BU70 441 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 SLC12A9Q9BXP2 914 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 EPB41L1Q9H4G0 881 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 KCNK4Q9NYG8 393 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 FAM8A1Q9UBU6 413 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 MARCOQ9UEW3 520 aaPredicted RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 PTBP2Q9UKA9 531 aaKnown RBP10.27□□□□□ -0.77
ATL3-204ENST00000540699 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 PCM1Q15154 2024 aa10.27□□□□□ -0.77
ATL3-204ENST00000540699 IGHV1OR21-1A0A087WYE8 117 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 UBFD1O14562 309 aaKnown RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 CASC3O15234 703 aaKnown RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 ZW10O43264 779 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 PSIP1O75475 530 aaKnown RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 VIPP01282 170 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 CD1CP29017 333 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 EEF1DP29692 281 aaKnown RBP10.26□□□□□ -0.77
ATL3-204ENST00000540699 HK2P52789 917 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 CCL7P80098 99 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 GPLD1P80108 840 aa10.26□□□□□ -0.77
ATL3-204ENST00000540699 GPR18Q14330 331 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms