RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CCDC81Q6ZN84 652 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 DCP2Q8IU60 420 aaKnown RBP13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ZDHHC21Q8IVQ6 265 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 CCDC138Q96M89 665 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 SAMD11Q96NU1 681 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ALOXE3Q9BYJ1 711 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 PLGRKTQ9HBL7 147 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 MRPL17Q9NRX2 175 aaKnown RBP13.67□□□□□ -0.22
UBE3B-210ENST00000539599 RASSF1Q9NS23 344 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 KCNE1BA0A087WTH5 132 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 SLC1A7O00341 560 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 CCR2P41597 374 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ISL1P61371 349 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 VLDLRP98155 873 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 GRAMD4Q6IC98 578 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ZNF555Q8NEP9 628 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 CYB5D2Q8WUJ1 264 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 MED8Q96G25 268 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 TRMT2BQ96GJ1 504 aaKnown RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 KCTD5Q9NXV2 234 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ZDHHC3Q9NYG2 299 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ERVK-18Q9QC07 812 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 DYTNA2CJ06 578 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 E7EQ34 232 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 NEDD8-MDP1E9PL57 170 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 SEC14L2O76054 403 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 KRT6AP02538 564 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 KRT6BP04259 564 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 NTRK1P04629 796 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 HNRNPCP07910 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 PBLDP30039 288 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ETV3P41162 512 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 KRT6CP48668 564 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 GP2P55259 537 aaKnown RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 Q6ZVL8 140 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 GPR156Q8NFN8 814 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 TSEN34Q9BSV6 310 aaKnown RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 SUV39H2Q9H5I1 410 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 BRD9Q9H8M2 597 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 THG1LQ9NWX6 298 aaKnown RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 SIRT5Q9NXA8 310 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 HOXA2O43364 376 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ABCB1P08183 1280 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ACPPP15309 386 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 MSH3P20585 1137 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 FUT4P22083 530 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 NRIP1P48552 1158 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 DAPP51397 102 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 UGT8Q16880 541 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 GTF2IRD2BQ6EKJ0 949 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 C22orf39Q6P5X5 142 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 TPRG1Q6ZUI0 275 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 HSD11B1LQ7Z5J1 315 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 GTF2IRD2Q86UP8 949 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 CALHM3Q86XJ0 350 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 EID3Q8N140 333 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ARL10Q8N8L6 244 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 ELMO1Q92556 727 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 SCRN2Q96FV2 425 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 TPD52L3Q96J77 140 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 PANX1Q96RD7 426 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 NRTNQ99748 197 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 HCFC2Q9Y5Z7 792 aa13.66□□□□□ -0.22
UBE3B-210ENST00000539599 URODP06132 367 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 INHBBP09529 407 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 ENGP17813 658 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 BDKRB1P46663 353 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 CLDN8P56748 225 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 TTLL9Q3SXZ7 439 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 NOXRED1Q6NXP6 359 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 ZNF783Q6ZMS7 281 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SLC16A12Q6ZSM3 486 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SH3KBP1Q96B97 665 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 PYURFQ96I23 114 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 PLEKHA8Q96JA3 519 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 RBM4BQ9BQ04 359 aaKnown RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 RBM4Q9BWF3 364 aaKnown RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SLC46A2Q9BY10 475 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SH3PXD2BA1X283 911 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 LEFTY2O00292 366 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SAP18O00422 153 aaKnown RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 BCKDKO14874 412 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 TGM5O43548 720 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SCELO95171 688 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 OPN1SWP03999 348 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 LAMP1P11279 417 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 HOXB9P17482 250 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 AMD1P17707 334 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 CLK3P49761 638 aaKnown RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 C21orf59P57076 290 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms