RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OR2AJ1Q8NGZ0 328 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 RAB7BQ96AH8 199 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZNF576Q9H609 170 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SUSD2Q9UGT4 822 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLCO3A1Q9UIG8 710 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 IGKV6D-21A0A0A0MT36 114 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 LIN7AO14910 233 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 LATO43561 262 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 OR1I1O60431 355 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 KRT36O76013 467 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 FHP07954 510 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CSNK2A2P19784 350 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ST13P50502 369 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 CACNA2D1P54289 1103 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CDH12P55289 794 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 MTPNP58546 118 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SEMA3AQ14563 771 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC25A24Q6NUK1 477 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 DCUN1D3Q8IWE4 304 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 UBE2J2Q8N2K1 259 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 OXR1Q8N573 874 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 DDHD1Q8NEL9 900 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 THAP3Q8WTV1 239 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ART5Q96L15 291 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC35A5Q9BS91 424 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 TBC1D10AQ9BXI6 508 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZNF282Q9UDV7 671 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 SNX7Q9UNH6 387 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 MED31Q9Y3C7 131 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 LOC730098B7Z3J9 87 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 FAM227AF5H4B4 570 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 H0YC42 278 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 TLX3O43711 291 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 PLIN3O60664 434 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 C6P13671 934 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 FBLP22087 321 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ENPP2Q13822 863 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 GANABQ14697 944 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC9A4Q6AI14 798 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SMYD5Q6GMV2 418 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CXorf57Q6NSI4 855 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 KCTD8Q6ZWB6 473 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC39A11Q8N1S5 342 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SETD6Q8TBK2 473 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 RHBDD1Q8TEB9 315 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZDHHC1Q8WTX9 485 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 PRR11Q96HE9 360 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 PALMDQ9NP74 551 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CLEC4AQ9UMR7 237 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 GLOD5A6NK44 160 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 UNC5CO95185 931 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 IL33O95760 270 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 C5AR1P21730 350 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 PDX1P52945 283 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SCARB2Q14108 478 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 PRKD1Q15139 912 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZCCHC12Q6PEW1 402 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 PEG10Q86TG7 708 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC34A3Q8N130 599 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 NXPE1Q8N323 547 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC2A13Q96QE2 648 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 GATA5Q9BWX5 397 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 OR51B5Q9H339 312 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 NOL6Q9H6R4 1146 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 PDE7BQ9NP56 450 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 BATF3Q9NR55 127 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 RASSF1Q9NS23 344 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZDHHC7Q9NXF8 308 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 MAFFQ9ULX9 164 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 GLI3P10071 1580 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ZNF726A6NNF4 738 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 BTN3A3O00478 584 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SOCS5O75159 536 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OAZ2O95190 189 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 AHSGP02765 367 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 THEGLP0DJG4 465 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ANPEPP15144 967 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 NELFEP18615 380 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 PTX3P26022 381 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 SHMT2P34897 504 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SOX9P48436 509 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RNF144AP50876 292 aaPredicted RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 KCNJ11Q14654 390 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 UBAP2Q5T6F2 1119 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 FRRS1Q6ZNA5 592 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PQLC3Q8N755 202 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 OR2T3Q8NH03 318 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 FOXJ1Q92949 421 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SLC38A4Q969I6 547 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 CLPTM1LQ96KA5 538 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SH3GL2Q99962 352 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 EFCAB11Q9BUY7 163 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ALG2Q9H553 416 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 PLEKHA1Q9HB21 404 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 GIN1Q9NXP7 522 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 ACTL7AQ9Y615 435 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 SLX4Q8IY92 1834 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RBM47A0AV96 593 aaKnown RBP5.22□□□□□ -1.57
LRP6-203ENST00000538239 ZNF823P16415 610 aa5.22□□□□□ -1.57
LRP6-203ENST00000538239 RANBP1P43487 201 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms