RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 WT1P19544 449 aaPredicted RBP22.18■■□□□ 1.14
CLTA-209ENST00000538225 GRIA3P42263 894 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 ITGA1P56199 1179 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 YBX1P67809 324 aaKnown RBP22.18■■□□□ 1.14
CLTA-209ENST00000538225 ABHD18Q0P651 414 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 ILF2Q12905 390 aaKnown RBP22.18■■□□□ 1.14
CLTA-209ENST00000538225 SP140Q13342 867 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 PHKG1Q16816 387 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 UBAP2Q5T6F2 1119 aaKnown RBP22.18■■□□□ 1.14
CLTA-209ENST00000538225 FCRL6Q6DN72 434 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 CCDC138Q96M89 665 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 CHRNA10Q9GZZ6 450 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 TSPYL1Q9H0U9 437 aa22.18■■□□□ 1.14
CLTA-209ENST00000538225 E7ENX8 843 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 K7ENP7 123 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 FKBP9O95302 570 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 HIST1H2AGP0C0S8 130 aaPredicted RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 HIST1H2ADP20671 130 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 CMPK1P30085 196 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 GABRA4P48169 554 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 POU4F1Q01851 419 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 TAP2Q03519 686 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 USP10Q14694 798 aaKnown RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 GRTP1Q5TC63 336 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 INO80CQ6PI98 192 aaPredicted RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 MBOAT1Q6ZNC8 495 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 RELL1Q8IUW5 271 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 IFT20Q8IY31 132 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 GPR135Q8IZ08 494 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 NKAPQ8N5F7 415 aaKnown RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 SLC38A9Q8NBW4 561 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 ZUFSPQ96AP4 578 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 KIAA1143Q96AT1 154 aaPredicted RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 MRRFQ96E11 262 aaKnown RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 PDLIM5Q96HC4 596 aaKnown RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 HIST1H2AHQ96KK5 128 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 HIST1H2AJQ99878 128 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 H2AFJQ9BTM1 129 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 SPRTNQ9H040 489 aaPredicted RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 GPN2Q9H9Y4 310 aaPredicted RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 GPAMQ9HCL2 828 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 IRAK4Q9NWZ3 460 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 STOX2Q9P2F5 926 aaPredicted RBP22.17■■□□□ 1.14
CLTA-209ENST00000538225 TAC3Q9UHF0 121 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 IKZF3Q9UKT9 509 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 PADI1Q9ULC6 663 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 NFU1Q9UMS0 254 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 PLCL2Q9UPR0 1127 aa22.17■■□□□ 1.14
CLTA-209ENST00000538225 E7EQ34 232 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 CPNE3O75131 537 aaKnown RBP22.16■■□□□ 1.14
CLTA-209ENST00000538225 OR2B3O76000 313 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 MT-ND3P03897 115 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 CTSBP07858 339 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 IMPA1P29218 277 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 PHBP35232 272 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 SPRP35270 261 aaPredicted RBP22.16■■□□□ 1.14
CLTA-209ENST00000538225 STAT5AP42229 794 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 THEMIS2Q5TEJ8 643 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 GPR155Q7Z3F1 870 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 MCATQ8IVS2 390 aaKnown RBP22.16■■□□□ 1.14
CLTA-209ENST00000538225 ANKRD49Q8WVL7 239 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 CLIP3Q96DZ5 547 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 GPR22Q99680 433 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 SLC7A5P2Q9GIP4 190 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 CDC42EP4Q9H3Q1 356 aaKnown RBP22.16■■□□□ 1.14
CLTA-209ENST00000538225 EURLQ9NYK6 297 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 PCDHB3Q9Y5E6 796 aa22.16■■□□□ 1.14
CLTA-209ENST00000538225 PABPN1LA6NDY0 278 aaKnown RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 TARM1B6A8C7 271 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 PHGDHO43175 533 aaKnown RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 ZNF749O43361 778 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 ACSL3O95573 720 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 NAB1Q13506 487 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 COL9A2Q14055 689 aaPredicted RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 LRRC56Q8IYG6 542 aaPredicted RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 ZSCAN1Q8NBB4 408 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 TSPAN17Q96FV3 270 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 DPH7Q9BTV6 452 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 TRIM54Q9BYV2 358 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 ATG10Q9H0Y0 220 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 ACTR5Q9H9F9 607 aaPredicted RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 AKIRIN1Q9H9L7 192 aaPredicted RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 L2HGDHQ9H9P8 463 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 POPDC3Q9HBV1 291 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 SLC6A20Q9NP91 592 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 MRPS30Q9NP92 439 aaKnown RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 LHX9Q9NQ69 397 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 ARL15Q9NXU5 204 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 UTP6Q9NYH9 597 aaKnown RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 CROTQ9UKG9 612 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 RALYQ9UKM9 306 aaKnown RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 PCDHGA4Q9Y5G9 962 aa22.15■■□□□ 1.14
CLTA-209ENST00000538225 SNRNP200O75643 2136 aaKnown RBP22.15■■□□□ 1.14
CLTA-209ENST00000538225 CDC7O00311 574 aa22.14■■□□□ 1.13
CLTA-209ENST00000538225 NRP2O60462 931 aa22.14■■□□□ 1.13
CLTA-209ENST00000538225 STMN1P16949 149 aa22.14■■□□□ 1.13
CLTA-209ENST00000538225 DLSTP36957 453 aa22.14■■□□□ 1.13
CLTA-209ENST00000538225 GPS2Q13227 327 aa22.14■■□□□ 1.13
CLTA-209ENST00000538225 ZC3H12BQ5HYM0 836 aaKnown RBP22.14■■□□□ 1.13
CLTA-209ENST00000538225 ICE2Q659A1 982 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms