RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 PEX12O00623 359 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC9A3R1O14745 358 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CAPN9O14815 690 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 BCAT2O15382 392 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 INSIG1O15503 277 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PRPF4O43172 522 aaKnown RBP eCLIP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TXNL1O43396 289 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ZBTB14O43829 449 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FZD7O75084 574 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RTN2O75298 545 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 LRCH4O75427 683 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ERAL1O75616 437 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PIAS2O75928 621 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DNAJB5O75953 348 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 UNC5CO95185 931 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 LUC7L3O95232 432 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SPDEFO95238 335 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GOSR1O95249 250 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RASAL1O95294 804 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PGM3O95394 542 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CAVIN2O95810 425 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 LATS1O95835 1130 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 F9P00740 461 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 APODP05090 189 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SERPING1P05155 500 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ABCB1P08183 1280 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DLDP09622 509 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 COX7A2P14406 83 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FERP16591 822 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TMEM11P17152 192 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ERCC2P18074 760 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 NTSR1P30989 418 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CCR1P32246 355 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ACSL1P33121 698 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RDXP35241 583 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GP5P40197 560 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 P2RY2P41231 377 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PTPN9P43378 593 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GSTM5P46439 218 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 NSFP46459 744 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RGRP47804 291 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MARCKSL1P49006 195 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC11A2P49281 568 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 HARS2P49590 506 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SULT1E1P49888 294 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CCR5P51681 352 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PLK1P53350 603 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC8A3P57103 927 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TAS2R38P59533 333 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 BPIFB3P59826 476 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RPS14P62263 151 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CXADRP78310 365 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MRPS21P82921 87 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 BNC1Q01954 994 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC25A11Q02978 314 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DEUP1Q05D60 604 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 KLHL30Q0D2K2 578 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 AP1B1Q10567 949 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC10A2Q12908 348 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GPS1Q13098 491 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CBX3Q13185 183 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ATP1A4Q13733 1029 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DPYSQ14117 519 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CYTH1Q15438 398 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 KYNUQ16719 465 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SMTNL2Q2TAL5 461 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 P3H1Q32P28 736 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ZNF528Q3MIS6 628 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 POM121L1PQ3SYA9 428 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CD300EQ496F6 205 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 PLK5Q496M5 336 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MPPE1Q53F39 396 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 KRTCAP3Q53RY4 240 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CRB2Q5IJ48 1285 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TOR1AIP1Q5JTV8 583 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 EFHC1Q5JVL4 640 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CCDC122Q5T0U0 273 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 C10orf76Q5T2E6 689 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MPP7Q5T2T1 576 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TMTC4Q5T4D3 741 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DCAF12L1Q5VU92 463 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CACHD1Q5VU97 1274 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 GARNL3Q5VVW2 1013 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SPECC1LQ69YQ0 1117 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DGAT2L7PQ6IED9 249 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TCEAL6Q6IPX3 200 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 RAB12Q6IQ22 244 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 KLHL35Q6PF15 583 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 DRICH1Q6PGQ1 229 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SHQ1Q6PI26 577 aaKnown RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CRIP3Q6Q6R5 217 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 SLC22A25Q6T423 547 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TRIM72Q6ZMU5 477 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 KIAA0408Q6ZU52 694 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MICALCLQ6ZW33 695 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CHST9Q7L1S5 443 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CACNA2D4Q7Z3S7 1137 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ADCK2Q7Z695 626 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 ADGRG6Q86SQ4 1221 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms