RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 TAS2R50P59544 299 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 SNTB1Q13884 538 aaKnown RBP8.7□□□□□ -1.02
USP28-205ENST00000537706 CT47A1Q5JQC4 288 aaPredicted RBP8.7□□□□□ -1.02
USP28-205ENST00000537706 DET1Q7L5Y6 550 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 PHF13Q86YI8 300 aaPredicted RBP8.7□□□□□ -1.02
USP28-205ENST00000537706 SLC13A5Q86YT5 568 aaPredicted RBP8.7□□□□□ -1.02
USP28-205ENST00000537706 SLC5A8Q8N695 610 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 ARRDC2Q8TBH0 407 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 EID2BQ96D98 161 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 DCUN1D1Q96GG9 259 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 SELENOSQ9BQE4 189 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 ANKRD10Q9NXR5 420 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
USP28-205ENST00000537706 TMPRSS11EQ9UL52 423 aa8.7□□□□□ -1.02
USP28-205ENST00000537706 SEC16AO15027 2179 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 SPTBP11277 2137 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 GABRR3A8MPY1 467 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 SYT5O00445 386 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 PIRTP0C851 137 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 EPXP11678 715 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 TACR1P25103 407 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 TNNT3P45378 269 aaPredicted RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 TERF1P54274 439 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 FMO1Q01740 532 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 PTP4A2Q12974 167 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 PRKG2Q13237 762 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 FASTKQ14296 549 aaKnown RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 KIR2DS3Q14952 304 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 TAZQ16635 292 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 BTBD16Q32M84 506 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 CHRFAM7AQ494W8 412 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 BCL7AQ4VC05 210 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 ISM2Q6H9L7 571 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 HEPHL1Q6MZM0 1159 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 BHLHB9Q6PI77 547 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 B3GNT6Q6ZMB0 384 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 ARHGEF18Q6ZSZ5 1173 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 KIF18BQ86Y91 864 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 CREB3L4Q8TEY5 395 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 LINC00615Q96LM1 132 aaPredicted RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 STK33Q9BYT3 514 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 HSD3B7Q9H2F3 369 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 VPS37BQ9H9H4 285 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 BPIFA1Q9NP55 256 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 OR6C2Q9NZP2 312 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 IMPACTQ9P2X3 320 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 PYCARDQ9ULZ3 195 aa8.69□□□□□ -1.02
USP28-205ENST00000537706 KLF13Q9Y2Y9 288 aaPredicted RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 FBN1P35555 2871 aaKnown RBP8.69□□□□□ -1.02
USP28-205ENST00000537706 LOC102723996A0A087X1L8 192 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 TUBAL3A6NHL2 446 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 CLCA1A8K7I4 914 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 KLRC4-KLRK1H3BQV0 150 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 CBFA2T2O43439 604 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 NME2P1O60361 137 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 SLC25A12O75746 678 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 NME2P22392 152 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ACVR2AP27037 513 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 RPL7AP62424 266 aaKnown RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 NIPAL4Q0D2K0 466 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 IFI16Q16666 785 aaKnown RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 CCDC122Q5T0U0 273 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 UNC5AQ6ZN44 842 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ULK2Q8IYT8 1036 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 MAML1Q92585 1016 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 RNASE6Q93091 150 aaKnown RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 MESP1Q9BRJ9 268 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 THAP2Q9H0W7 228 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ATG10Q9H0Y0 220 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 MTRF1LQ9UGC7 380 aaKnown RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 POLG2Q9UHN1 485 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 GTF3C1Q12789 2109 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 IGLV3-12A0A075B6K2 115 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 GLYATL1P3A0A0U1RQE8 302 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 F8VZ95 297 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 BCKDKO14874 412 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 GFPT2O94808 682 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ANXA5P08758 320 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 CCNCP24863 283 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ASCL1P50553 236 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ARSEP51690 589 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 CLEC16AQ2KHT3 1053 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 MUM1Q2TAK8 710 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 KLHDC7AQ5VTJ3 777 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 KAZNQ674X7 775 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 FCRLBQ6BAA4 426 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 PLAG1Q6DJT9 500 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 NT5DC3Q86UY8 548 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 HIPK1Q86Z02 1210 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 RPRMLQ8N4K4 120 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 PHC3Q8NDX5 983 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 ENOX1Q8TC92 643 aaKnown RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 TFGQ92734 400 aaPredicted RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 FATE1Q969F0 183 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 SLC22A18Q96BI1 424 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 NAP1L5Q96NT1 182 aaPredicted RBP8.68□□□□□ -1.02
USP28-205ENST00000537706 TTYH2Q9BSA4 534 aa8.68□□□□□ -1.02
USP28-205ENST00000537706 TRABDQ9H4I3 376 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms