RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CLOCKO15516 846 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 TPST1O60507 370 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 HOXB6P17509 224 aaKnown RBP9.04□□□□□ -0.96
UBE3B-207ENST00000537063 ITPKAP23677 461 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 ALDH3B2P48448 385 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 NEK2P51955 445 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 TUBA4AP68366 448 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 TMEM115Q12893 351 aaPredicted RBP9.04□□□□□ -0.96
UBE3B-207ENST00000537063 DPY19L1Q2PZI1 675 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 NADK2Q4G0N4 442 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 C9orf64Q5T6V5 341 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 IYDQ6PHW0 289 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 SKA2Q8WVK7 121 aaPredicted RBP9.04□□□□□ -0.96
UBE3B-207ENST00000537063 AP2M1Q96CW1 435 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 MTFMTQ96DP5 389 aaKnown RBP9.04□□□□□ -0.96
UBE3B-207ENST00000537063 ITCHQ96J02 903 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 OR4K3Q96R72 315 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 COMMD3-BMI1R4GMX3 469 aa9.04□□□□□ -0.96
UBE3B-207ENST00000537063 CROCCQ5TZA2 2017 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PRRT4C9JH25 899 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ZNF23P17027 643 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 IMPA1P29218 277 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 HNF4AP41235 474 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ADARB1P78563 741 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 DPTQ07507 201 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 MAP7Q14244 749 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 NKG7Q16617 165 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 HNRNPA1L2Q32P51 320 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CYBRD1Q53TN4 286 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 NOXRED1Q6NXP6 359 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 MICU2Q8IYU8 434 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CLHC1Q8NHS4 586 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ARRDC3Q96B67 414 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 WDR34Q96EX3 536 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 LINC00615Q96LM1 132 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 BDH2Q9BUT1 245 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 MAGIXQ9H6Y5 334 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 RMND5AQ9H871 391 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 TUBA8Q9NY65 449 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 GPRC5BQ9NZH0 403 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ITM2BQ9Y287 266 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 EDDM13A0A1B0GTR0 161 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ELOVL7A1L3X0 281 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PER2O15055 1255 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 HPRP00739 348 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 GNAO1P09471 354 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 XPAP23025 273 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 GSTT1P30711 240 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 RPS9P46781 194 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CCR3P51677 355 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 METAP1P53582 386 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PLOD1Q02809 727 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 EIF4HQ15056 248 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ACOX1Q15067 660 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 GTDC1Q4AE62 458 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 SYTL3Q4VX76 610 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 FAM98BQ52LJ0 330 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ZNF697Q5TEC3 545 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 AGTRAPQ6RW13 159 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PGBD3Q8N328 593 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 OR10A6Q8NH74 314 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ADAMTS16Q8TE57 1224 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 TMEM159Q96B96 161 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 DGCR14Q96DF8 476 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PKP4Q99569 1192 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 HAUS8Q9BT25 410 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ATG10Q9H0Y0 220 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 TMEM245Q9H330 911 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PIF1Q9H611 641 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 SMPD3Q9NY59 655 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 LAMA2P24043 3122 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 E7EQ34 232 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 H0YAE9 185 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 SCN2BO60939 215 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 OR6B1O95007 311 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 BMP10O95393 424 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CATP04040 527 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PRPS1L1P21108 318 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 S100A3P33764 101 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 PREPP48147 710 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 DOC2AQ14183 400 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CCSMST1Q4G0I0 132 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 TMEM52BQ4KMG9 183 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 CAMKMTQ7Z624 323 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 LILRA3Q8N6C8 439 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 FAM86B1Q8N7N1 296 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 FAM47BQ8NA70 645 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 TSPAN14Q8NG11 270 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 RMND5BQ96G75 393 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 REXO5Q96IC2 774 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 RNF145Q96MT1 663 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 ASB16Q96NS5 453 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 UGT2B28Q9BY64 529 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 TRPV4Q9HBA0 871 aa9.03□□□□□ -0.96
UBE3B-207ENST00000537063 DCAF13Q9NV06 445 aaKnown RBP9.03□□□□□ -0.96
UBE3B-207ENST00000537063 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms