RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 CPNE7Q9UBL6 633 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 SLC23A2Q9UGH3 650 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 TRPS1Q9UHF7 1281 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 LCMT1Q9UIC8 334 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 PILRAQ9UKJ1 303 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 SHOC2Q9UQ13 582 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 KCNK6Q9Y257 313 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 HEY1Q9Y5J3 304 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATM-224ENST00000534625 PRRC2CQ9Y520 2896 aaKnown RBP5.08□□□□□ -1.6
ATM-224ENST00000534625 MED13Q9UHV7 2174 aa5.08□□□□□ -1.6
ATM-224ENST00000534625 USP9XQ93008 2570 aaPredicted RBP5.08□□□□□ -1.6
ATM-224ENST00000534625 CNTRLQ7Z7A1 2325 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 USP9YO00507 2555 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 KIR2DS5A0A0G2JLQ3 304 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 A0A0G2JNG1 304 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 OR5K4A6NMS3 321 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 A8MU76 341 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 KIR2DS3K7RE56 304 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 APOL1O14791 398 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CHUKO15111 745 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 DUX1O43812 170 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SLC28A2O43868 658 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 RAD1O60671 282 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SNX2O60749 519 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 FAM20BO75063 409 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SLC25A14O95258 325 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 MT-CYBP00156 380 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 F3P13726 295 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 LIFP15018 202 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 BPIP17213 487 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 NR4A1P22736 598 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CD40P25942 277 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 PTPN3P26045 913 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ARHGAP25P42331 645 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 DCDC1P59894 354 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 UBE2IP63279 158 aaKnown RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 MC2RQ01718 297 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CDK18Q07002 472 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CD69Q07108 199 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 AP1B1Q10567 949 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 GALNT3Q14435 633 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 KIR2DS5Q14953 304 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 PDK1Q15118 436 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 KHDC1Q4VXA5 237 aaKnown RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 TEX44Q53QW1 395 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 DCAF12Q5T6F0 453 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 LRRC38Q5VT99 294 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ALS2CLQ60I27 953 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ANKS6Q68DC2 871 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 MFSD7Q6UXD7 560 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 TIPARPQ7Z3E1 657 aaKnown RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 SLC9B2Q86UD5 537 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ZNF547Q8IVP9 402 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CACNA2D3Q8IZS8 1091 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 TRAM1L1Q8N609 369 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CCDC112Q8NEF3 446 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SPATA22Q8NHS9 363 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 UBXN4Q92575 508 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 NINJ1Q92982 152 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 GLYATL1Q969I3 302 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SH3KBP1Q96B97 665 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 RTP4Q96DX8 246 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 AHCYL2Q96HN2 611 aaKnown RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 ZNF830Q96NB3 372 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 AGAP3Q96P47 875 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 CTRCQ99895 268 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ZSCAN5AQ9BUG6 496 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SPATA16Q9BXB7 569 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 TBC1D10AQ9BXI6 508 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ASPSCR1Q9BZE9 553 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SLC25A51Q9H1U9 297 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 MS4A5Q9H3V2 200 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 NHEJ1Q9H9Q4 299 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 UCK1Q9HA47 277 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 GLOD4Q9HC38 313 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 APMAPQ9HDC9 416 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 FBXO8Q9NRD0 319 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 KLC4Q9NSK0 619 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 HAUS2Q9NVX0 235 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 GEMIN8Q9NWZ8 242 aaKnown RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 OGFRQ9NZT2 677 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 ZNF624Q9P2J8 865 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 NFKBIL1Q9UBC1 381 aaPredicted RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 TMPRSS11EQ9UL52 423 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 REXO2Q9Y3B8 237 aaKnown RBP5.07□□□□□ -1.6
ATM-224ENST00000534625 ZNF711Q9Y462 761 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 HYOU1Q9Y4L1 999 aa5.07□□□□□ -1.6
ATM-224ENST00000534625 NOTCH2Q04721 2471 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 RELNP78509 3460 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 MN1Q10571 1320 aaPredicted RBP5.06□□□□□ -1.6
ATM-224ENST00000534625 LOC101059948A0A1B0GTJ6 334 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 LOC285095A0A1B0GVY8 99 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 LILRA5A6NI73 299 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 GPR89AB7ZAQ6 455 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 KMOO15229 486 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 NKX2-8O15522 239 aa5.06□□□□□ -1.6
ATM-224ENST00000534625 AKR1B10O60218 316 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms