RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 KMT5CQ86Y97 462 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 CENPLQ8N0S6 344 aaPredicted RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 LSMEM2Q8N112 164 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 RAB42Q8N4Z0 105 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 NKAPQ8N5F7 415 aaKnown RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 PYCR2Q96C36 320 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 MED8Q96G25 268 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 CRELD1Q96HD1 420 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 ZNF578Q96N58 590 aaPredicted RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 DHRS4Q9BTZ2 278 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 DDA1Q9BW61 102 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 DERL2Q9GZP9 239 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 FGF21Q9NSA1 209 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 IGSF5Q9NSI5 407 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 CUEDC1Q9NWM3 386 aaPredicted RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 ARL15Q9NXU5 204 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 LNPEPQ9UIQ6 1025 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 PCDHGA7Q9Y5G6 932 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 ANKRD11Q6UB99 2663 aaPredicted RBP13.5□□□□□ -0.25
VPS11-205ENST00000534551 LOC400499M0QZD8 3231 aa13.5□□□□□ -0.25
VPS11-205ENST00000534551 TMEM8BA6NDV4 472 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 SMIM23A6NLE4 172 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 SLC16A5O15375 505 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 ITPKBP27987 946 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 RPA3P35244 121 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 GRIA3P42263 894 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 GABRA4P48169 554 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 SERPINB8P50452 374 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 RAB15P59190 212 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 CLN3Q13286 438 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 NAE1Q13564 534 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 DCAF12Q5T6F0 453 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 AGTRAPQ6RW13 159 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 VASH2Q86V25 355 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 PLD6Q8N2A8 252 aaKnown RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 EIF1ADQ8N9N8 165 aaKnown RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 OR1L3Q8NH93 324 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 FGF11Q92914 225 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 ZNF501Q96CX3 271 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 PDLIM5Q96HC4 596 aaKnown RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 SYTL2Q9HCH5 934 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 PDE7BQ9NP56 450 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 RRAGDQ9NQL2 400 aaPredicted RBP13.49□□□□□ -0.25
VPS11-205ENST00000534551 FBXO8Q9NRD0 319 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 PCDHGA3Q9Y5H0 932 aa13.49□□□□□ -0.25
VPS11-205ENST00000534551 A0A096LPK6 155 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
VPS11-205ENST00000534551 FOXO6A8MYZ6 492 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 TRIM49D1C9J1S8 452 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 NVLO15381 856 aaKnown RBP13.48□□□□□ -0.25
VPS11-205ENST00000534551 CTSVO60911 334 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 STK17BO94768 372 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 KIAA0754O94854 1291 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 C2P06681 752 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 MSH2P43246 934 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 MAGEA12P43365 314 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 SLCO1A2P46721 670 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 GLRBP48167 497 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 ARHGAP19Q14CB8 494 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 ICE2Q659A1 982 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 FIGLAQ6QHK4 219 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 CEACAM20Q6UY09 585 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 TIPARPQ7Z3E1 657 aaKnown RBP13.48□□□□□ -0.25
VPS11-205ENST00000534551 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 CARFQ8N187 725 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 OR2W6PQ8NHA6 318 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 MCOLN3Q8TDD5 553 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 EPS8L3Q8TE67 593 aaKnown RBP13.48□□□□□ -0.25
VPS11-205ENST00000534551 AENQ8WTP8 325 aaKnown RBP13.48□□□□□ -0.25
VPS11-205ENST00000534551 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 NXNL1Q96CM4 212 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 UBXN10Q96LJ8 280 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 OR4K3Q96R72 315 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 ULBP3Q9BZM4 244 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 VPS11Q9H270 941 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 CCDC177Q9NQR7 707 aaPredicted RBP13.48□□□□□ -0.25
VPS11-205ENST00000534551 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 OARD1Q9Y530 152 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 PCDHB11Q9Y5F2 797 aa13.48□□□□□ -0.25
VPS11-205ENST00000534551 RAD1O60671 282 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 DLGAP3O95886 979 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 STATHP02808 62 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 NTRK1P04629 796 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 FGF5P12034 268 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 TFEBP19484 476 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 HSD17B3P37058 310 aa13.47□□□□□ -0.25
VPS11-205ENST00000534551 EIF2S3P41091 472 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms