RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ALG10Q5BKT4 473 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 ALG10BQ5I7T1 473 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 CXorf66Q5JRM2 361 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 RAB41Q5JT25 222 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 CEP78Q5JTW2 689 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 SFMBT2Q5VUG0 894 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 CPLX2Q6PUV4 134 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 TMCO3Q6UWJ1 677 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNF788Q6ZQV5 615 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 CLEC17AQ6ZS10 378 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 NOXA1Q86UR1 476 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 GGNQ86UU5 652 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 LRRC57Q8N9N7 239 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 MCPH1Q8NEM0 835 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 MAPK15Q8TD08 544 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 HASPINQ8TF76 798 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 DPF1Q92782 380 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 PNRC2Q9NPJ4 139 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 TMEM45AQ9NWC5 275 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 WSB2Q9NYS7 404 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 AGO2Q9UKV8 859 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM237AA0A1B0GTK4 181 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 GSTTP1A0A1W2PQM5 241 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 KDM4EB2RXH2 506 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 C19orf84I3L1E1 186 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 PRKAB2O43741 272 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 DUX1O43812 170 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 TADA2AO75478 443 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 IPO7O95373 1038 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 HOXB5P09067 269 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 NR2F1P10589 423 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 HSPD1P10809 573 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 HOXB2P14652 356 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 LIFP15018 202 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 IL11P20809 199 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 BMP5P22003 454 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 ATP5F1P24539 256 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 C21orf59P57076 290 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 FOLH1Q04609 750 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 RUNX2Q13950 521 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 ASTE1Q2TB18 679 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 PIK3CD-AS1Q5SR53 167 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 KIAA0930Q6ICG6 404 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 JADE1Q6IE81 842 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 TMEM154Q6P9G4 183 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 CTR9Q6PD62 1173 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 FJX1Q86VR8 437 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 WDR63Q8IWG1 891 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 ZDHHC23Q8IYP9 409 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNF444Q8N0Y2 327 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 TAGAPQ8N103 731 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 SCML4Q8N228 414 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 TMTC2Q8N394 836 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 GALNT16Q8N428 558 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 KDM1BQ8NB78 822 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 GJC3Q8NFK1 279 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 ITLN2Q8WWU7 325 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 SNAPC3Q92966 411 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 MSI2Q96DH6 328 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 C1QTNF5Q9BXJ0 243 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 SCAND2PQ9GZW5 306 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 PCED1AQ9H1Q7 454 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 PDZD7Q9H5P4 517 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 MVB12BQ9H7P6 319 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 PDE7BQ9NP56 450 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 RAP2CQ9Y3L5 183 aa4.43□□□□□ -1.7
ECHDC1-223ENST00000534442 TENM2Q9NT68 2774 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 A0A096LPK6 155 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 TYW5A2RUC4 315 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 SH2B2O14492 632 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 YKT6O15498 198 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 KIF1CO43896 1103 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 ATP2C2O75185 946 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 CSDE1O75534 798 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 BCAR3O75815 825 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 SEC24AO95486 1093 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 TUBBP07437 444 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 SELLP14151 372 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 IL7RP16871 459 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 MPGP29372 298 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 UGT1A5P35504 534 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 OPRD1P41143 372 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 EIF2DP41214 584 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 GPR12P47775 334 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 NLRP11P59045 1033 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 TWF1Q12792 350 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 CDC20Q12834 499 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 FOXF2Q12947 444 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 PDGFRLQ15198 375 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 SGO1Q5FBB7 561 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 NUGGCQ68CJ6 796 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 MIS18BP1Q6P0N0 1132 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 TMEM71Q6P5X7 295 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 GLDNQ6ZMI3 551 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 QSOX2Q6ZRP7 698 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 GSTA5Q7RTV2 222 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 GPSM1Q86YR5 675 aa4.42□□□□□ -1.7
ECHDC1-223ENST00000534442 DPP10Q8N608 796 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms