RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CHAF1BQ13112 559 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FASTKQ14296 549 aaKnown RBP13.49□□□□□ -0.25
SF3B2-215ENST00000534307 PPP1R7Q15435 360 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
SF3B2-215ENST00000534307 KLHL38Q2WGJ6 581 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 NKAIN1Q4KMZ8 207 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 C1orf189Q5VU69 101 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 PAPD7Q5XG87 772 aaKnown RBP13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FIGLAQ6QHK4 219 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 NEK10Q6ZWH5 1172 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 CREG2Q8IUH2 290 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 SPNS2Q8IVW8 549 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 LMNTD2Q8IXW0 634 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 OR2L3Q8NG85 312 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 MAGEC3Q8TD91 643 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 ZUFSPQ96AP4 578 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FOPNLQ96NB1 174 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 SLC7A5P2Q9GIP4 190 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 ING2Q9H160 280 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 PLAC1Q9HBJ0 212 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FBXO6Q9NRD1 293 aaPredicted RBP13.49□□□□□ -0.25
SF3B2-215ENST00000534307 SLC22A11Q9NSA0 550 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 INTS7Q9NVH2 962 aaKnown RBP13.49□□□□□ -0.25
SF3B2-215ENST00000534307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.49□□□□□ -0.25
SF3B2-215ENST00000534307 MAD1L1Q9Y6D9 718 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FAM169AQ9Y6X4 670 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 CCDC88CQ9P219 2028 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FITM1A5D6W6 292 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 ARGFXA6NJG6 315 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 DNALI1O14645 258 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 FANCGO15287 622 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 NRP2O60462 931 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 CNOT3O75175 753 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 ONECUT2O95948 504 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 YBX1P67809 324 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 MPP1Q00013 466 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 CRYMQ14894 314 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 IGFBP7Q16270 282 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 MSS51Q4VC12 460 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 C4orf17Q53FE4 359 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 MRPL14Q6P1L8 145 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 TMEM151BQ8IW70 566 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 RAB42Q8N4Z0 105 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 FBXO15Q8NCQ5 510 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 OR9A1PQ8NGU1 263 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 ASB11Q8WXH4 323 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 MIPEPQ99797 713 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 C17orf62Q9BQA9 187 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 IGSF5Q9NSI5 407 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 FBXO5Q9UKT4 447 aa13.48□□□□□ -0.25
SF3B2-215ENST00000534307 PCDHGA9Q9Y5G4 932 aaKnown RBP13.48□□□□□ -0.25
SF3B2-215ENST00000534307 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 OR2A25A4D2G3 310 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 E5RI56 91 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 GFYI3L273 518 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 BANF1O75531 89 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 HAUS5O94927 633 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 PGAM1P18669 254 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 CUL1Q13616 776 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 ARHGAP19Q14CB8 494 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 TTLL9Q3SXZ7 439 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 HSP90AA5PQ58FG0 334 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 ZC3H12BQ5HYM0 836 aaKnown RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 CYHR1Q6ZMK1 362 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 ASB18Q6ZVZ8 466 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 RNF44Q7L0R7 432 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 IGDCC3Q8IVU1 814 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 C2CD4AQ8NCU7 369 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 OR2Y1Q8NGV0 311 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 CD200R1Q8TD46 325 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 CALML6Q8TD86 181 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 DLG3Q92796 817 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 WDR83Q9BRX9 315 aaKnown RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 FAM167BQ9BTA0 163 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 AARSD1Q9BTE6 412 aaKnown RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 NDC1Q9BTX1 674 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 SLC6A20Q9NP91 592 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 FAM114A2Q9NRY5 505 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 TXLNGQ9NUQ3 528 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-215ENST00000534307 ASIC3Q9UHC3 531 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 PADI2Q9Y2J8 665 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 DHRS7Q9Y394 339 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 COMMD10Q9Y6G5 202 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 ANKRD12Q6UB98 2062 aa13.47□□□□□ -0.25
SF3B2-215ENST00000534307 FBN2P35556 2912 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 PCM1Q15154 2024 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 IGKV1-8A0A0C4DH67 115 aa13.46□□□□□ -0.25
SF3B2-215ENST00000534307 A0A1B0GX78 115 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms