RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PCM1Q15154 2024 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 ANKRD12Q6UB98 2062 aa14.81□□□□□ -0.04
CPSF1-211ENST00000533492 A0A0J9YVX5 310 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 DSCR3O14972 297 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 KIF5CO60282 957 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 PHF2O75151 1096 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 USP1O94782 785 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 CATP04040 527 aaKnown RBP14.8□□□□□ -0.04
CPSF1-211ENST00000533492 MCM3P25205 808 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 FNTAP49354 379 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 VSX2P58304 361 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-211ENST00000533492 RAPSNQ13702 412 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 FASTKQ14296 549 aaKnown RBP14.8□□□□□ -0.04
CPSF1-211ENST00000533492 GBX1Q14549 363 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 NAA25Q14CX7 972 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 PPP1R7Q15435 360 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 CYP2A13Q16696 494 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 NADK2Q4G0N4 442 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 WASHC2DQ5SRD0 308 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 OVCH1Q7RTY7 1134 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 HPS6Q86YV9 775 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 DENND6AQ8IWF6 608 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 REXO1L1PQ8IX06 675 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 OR2A1Q8NGT9 310 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 ACTRT1Q8TDG2 376 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 SMPDL3AQ92484 453 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 MIB2Q96AX9 1013 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 ACAT2Q9BWD1 397 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 FBXO6Q9NRD1 293 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-211ENST00000533492 C20orf96Q9NUD7 363 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-211ENST00000533492 P4HTMQ9NXG6 502 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 NEU2Q9Y3R4 380 aa14.8□□□□□ -0.04
CPSF1-211ENST00000533492 ZCWPW2A0A1B0GU75 182 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 ZNF839A8K0R7 811 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 ARHGEF33A8MVX0 844 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 KLHL41O60662 606 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 CTSVO60911 334 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 CNOT3O75175 753 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 VPS4BO75351 444 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 PSIP1O75475 530 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 ALBP02768 609 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 EIF2S1P05198 315 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 RPA3P35244 121 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 HSD17B2P37059 387 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 GCGRP47871 477 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 UBAP2LQ14157 1087 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 DCAF10Q5QP82 559 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 NEK10Q6ZWH5 1172 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 LMNTD2Q8IXW0 634 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 PPIL6Q8IXY8 311 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 NAT8LQ8N9F0 302 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 CPT1CQ8TCG5 803 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 FKBP10Q96AY3 582 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 SIGLEC10Q96LC7 697 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 MFRPQ9BY79 579 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 GRPEL1Q9HAV7 217 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 MRPS30Q9NP92 439 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 SLAMF7Q9NQ25 335 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 SLC22A11Q9NSA0 550 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 TRMT1Q9NXH9 659 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 KLHL42Q9P2K6 505 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 ZC3H7BQ9UGR2 993 aaKnown RBP14.79□□□□□ -0.04
CPSF1-211ENST00000533492 VPS4AQ9UN37 437 aa14.79□□□□□ -0.04
CPSF1-211ENST00000533492 A0A1W2PPV9 198 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 HYKKA2RU49 373 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 MYO1CO00159 1063 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 SYF2O95926 243 aaKnown RBP14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ALPPP05187 535 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ERVK-10P10266 1014 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 SLC1A2P43004 574 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 OR1D4P47884 311 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 CD97P48960 835 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 CLCN7P51798 805 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 FOXL2P58012 376 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 CUL1Q13616 776 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ARHGAP19Q14CB8 494 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.78□□□□□ -0.04
CPSF1-211ENST00000533492 VWA5B1Q5TIE3 1220 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 FRMPD2BQ6IN97 320 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 SUSD1Q6UWL2 747 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 PPP1R32Q7Z5V6 425 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 GALNT16Q8N428 558 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 GABPB2Q8TAK5 448 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-211ENST00000533492 KCNJ9Q92806 393 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 INPP5DQ92835 1189 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 NACC2Q96BF6 587 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ZNF285Q96NJ3 590 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 PKP4Q99569 1192 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 SMAD5Q99717 465 aaKnown RBP14.78□□□□□ -0.04
CPSF1-211ENST00000533492 DPH7Q9BTV6 452 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 WDR54Q9H977 334 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ATP13A2Q9NQ11 1180 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 UTP6Q9NYH9 597 aaKnown RBP14.78□□□□□ -0.04
CPSF1-211ENST00000533492 C5AR2Q9P296 337 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 ASIC3Q9UHC3 531 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 CDC23Q9UJX2 597 aa14.78□□□□□ -0.04
CPSF1-211ENST00000533492 FBXO5Q9UKT4 447 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms