RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 GABRA4P48169 554 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 SERPINB8P50452 374 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ATP6V0D1P61421 351 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 YBX1P67809 324 aaKnown RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ACY1Q03154 408 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TUBB3Q13509 450 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 CSHL1Q14406 222 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 IL11RAQ14626 422 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TMTC4Q5T4D3 741 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 KIAA1614Q5VZ46 1190 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 FCRL6Q6DN72 434 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 FIGLAQ6QHK4 219 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ADGRD1Q6QNK2 874 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TAOK1Q7L7X3 1001 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ADAMTSL2Q86TH1 951 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ZFAND4Q86XD8 727 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 CENPLQ8N0S6 344 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 UBLCP1Q8WVY7 318 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 PTERQ96BW5 349 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ZNF501Q96CX3 271 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 HIST1H2AHQ96KK5 128 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TEFMQ96QE5 360 aaKnown RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 MIPEPQ99797 713 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 HIST1H2AJQ99878 128 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ZPBPQ9BS86 351 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 H2AFJQ9BTM1 129 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ACAT2Q9BWD1 397 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TRIM54Q9BYV2 358 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 SPRY4Q9C004 299 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ATG10Q9H0Y0 220 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 IGSF5Q9NSI5 407 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ARL15Q9NXU5 204 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 UTP6Q9NYH9 597 aaKnown RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 TAC3Q9UHF0 121 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 RARRES3Q9UL19 164 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ACOT9Q9Y305 439 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 OARD1Q9Y530 152 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 KLK4Q9Y5K2 254 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 AHCTF1Q8WYP5 2266 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 MAP1BP46821 2468 aaKnown RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 EPG5Q9HCE0 2579 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 A0A087X1B8 175 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TRIM49D1C9J1S8 452 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 HCRTR1O43613 425 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TIAF1O95411 115 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 GUCA1CO95843 209 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 LTA4HP09960 611 aaKnown RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 CNTFP26441 200 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TYK2P29597 1187 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 CMPK1P30085 196 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 HSD17B3P37058 310 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 KCNC1P48547 511 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 PCBP4P57723 403 aaKnown RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TBPL1P62380 186 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 CDKL1Q00532 357 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 IRF9Q00978 393 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 PRDX1Q06830 199 aaKnown RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 NAE1Q13564 534 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TSTA3Q13630 321 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 OR4D1Q15615 310 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 ICE2Q659A1 982 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 CYB5D1Q6P9G0 228 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 BPHLQ86WA6 291 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 PPP1R3BQ86XI6 285 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 DNAJC22Q8N4W6 341 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 OR56A3Q8NH54 315 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 OR1L3Q8NH93 324 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 KCTD4Q8WVF5 259 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 KIAA1191Q96A73 305 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 NXNL1Q96CM4 212 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 SGPP1Q9BX95 441 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 NMRAL1Q9HBL8 299 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 SLC6A20Q9NP91 592 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 CCDC177Q9NQR7 707 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 ABCF3Q9NUQ8 709 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 INTS7Q9NVH2 962 aaKnown RBP11.53□□□□□ -0.56
SSBP3-214ENST00000533209 FETUBQ9UGM5 382 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 TLK1Q9UKI8 766 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 USP24Q9UPU5 2620 aa11.53□□□□□ -0.56
SSBP3-214ENST00000533209 ADAMTS20P59510 1910 aa11.52□□□□□ -0.56
SSBP3-214ENST00000533209 A0A096LPK6 155 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 IGKV1-8A0A0C4DH67 115 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 OR2A25A4D2G3 310 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 PABPN1LA6NDY0 278 aaKnown RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 TARM1B6A8C7 271 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 TMEM150CB9EJG8 249 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-214ENST00000533209 H3BMH7 237 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 MAP3K7O43318 606 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 NRP2O60462 931 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 CTSVO60911 334 aa11.52□□□□□ -0.57
SSBP3-214ENST00000533209 KRT37O76014 449 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms