RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 OR8K5Q8NH50 307 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 SMPDL3AQ92484 453 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 ANKRD7Q92527 254 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 ZUFSPQ96AP4 578 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 CCNL2Q96S94 520 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 TXLNGYQ9BZA5 131 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 SYNPO2LQ9H987 977 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 PARVBQ9HBI1 364 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 POPDC3Q9HBV1 291 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 CPNE5Q9HCH3 593 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 SOHLH2Q9NX45 425 aa13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 STOX2Q9P2F5 926 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-220ENST00000532375 NBEAQ8NFP9 2946 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 LOC101059948A0A1B0GTJ6 334 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 TARM1B6A8C7 271 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 CDC7O00311 574 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 CTSVO60911 334 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 NTRK1P04629 796 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 FAM153BP0C7A2 387 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 RHOXF2BP0C7M4 288 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 SAT1P21673 171 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 F8A1P23610 371 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 MAP4P27816 1152 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 GMPRP36959 345 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 ILF2Q12905 390 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 NAB1Q13506 487 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 FAM153CQ494X1 144 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 FBXO42Q6P3S6 717 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 VASH2Q86V25 355 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 CTAGE3PQ8IX95 158 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 CACNA2D3Q8IZS8 1091 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 NLGN4XQ8N0W4 816 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 GALNT6Q8NCL4 622 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 NLGN4YQ8NFZ3 816 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 MCOLN3Q8TDD5 553 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 UBXN10Q96LJ8 280 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 CCDC138Q96M89 665 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 MIPEPQ99797 713 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 RHOXF2Q9BQY4 288 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 ULBP3Q9BZM4 244 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 SPRTNQ9H040 489 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 ACSS3Q9H6R3 686 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 SLC6A20Q9NP91 592 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 PCDHB3Q9Y5E6 796 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 CCDC88CQ9P219 2028 aa13.4□□□□□ -0.26
TSPAN4-220ENST00000532375 OR2A25A4D2G3 310 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 TMEM150CB9EJG8 249 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 K7ENP7 123 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 PHGDHO43175 533 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 MYBL2P10244 700 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 SPRP35270 261 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 RORAP35398 523 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 STAT5AP42229 794 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 PRDX1Q06830 199 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 ABHD18Q0P651 414 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 GPS2Q13227 327 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 USP10Q14694 798 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 DEFB110Q30KQ9 67 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 ICE2Q659A1 982 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 ZNF385CQ66K41 422 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 ZNF425Q6IV72 752 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 CYB5D1Q6P9G0 228 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 INO80CQ6PI98 192 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 AGTRAPQ6RW13 159 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 C6orf15Q6UXA7 325 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 CEP128Q6ZU80 1094 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 RAB42Q8N4Z0 105 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 NKAPQ8N5F7 415 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 LRFN5Q96NI6 719 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 ACAT2Q9BWD1 397 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 SGPP1Q9BX95 441 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 EPB41L4BQ9H329 900 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 GPAMQ9HCL2 828 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 EURLQ9NYK6 297 aa13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 NOVA2Q9UNW9 492 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-220ENST00000532375 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 ZFYVE26Q68DK2 2539 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SCRG1O75711 98 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 ACSL3O95573 720 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SYF2O95926 243 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 LIFP15018 202 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 CYP2A7P20853 494 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 DLG1Q12959 904 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 LCN10Q6JVE6 187 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 PAQR7Q86WK9 346 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 MCATQ8IVS2 390 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SYTL1Q8IYJ3 562 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SPATA6LQ8N4H0 392 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 ESX1Q8N693 406 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 EIF1ADQ8N9N8 165 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 SLC44A1Q8WWI5 657 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 CYTH2Q99418 400 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 DPH7Q9BTV6 452 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 DERL2Q9GZP9 239 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 PCMTD2Q9NV79 361 aa13.38□□□□□ -0.27
TSPAN4-220ENST00000532375 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms