RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GSTM4Q03013 218 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 C3AR1Q16581 482 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 ZNF658BQ4V348 819 aaPredicted RBP8.82□□□□□ -1
NEDD8-206ENST00000531430 ABHD17BQ5VST6 288 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 YOD1Q5VVQ6 348 aaPredicted RBP8.82□□□□□ -1
NEDD8-206ENST00000531430 NLRP9Q7RTR0 991 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 LINC01555Q8NAE3 123 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 DNAJB8Q8NHS0 232 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 GSDMBQ8TAX9 411 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 MTFMTQ96DP5 389 aaKnown RBP8.82□□□□□ -1
NEDD8-206ENST00000531430 CABS1Q96KC9 395 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 TTC1Q99614 292 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 MIPEPQ99797 713 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 GORASP1Q9BQQ3 440 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 TSPAN10Q9H1Z9 355 aaPredicted RBP8.82□□□□□ -1
NEDD8-206ENST00000531430 SLC26A1Q9H2B4 701 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
NEDD8-206ENST00000531430 NLE1Q9NVX2 485 aaPredicted RBP8.82□□□□□ -1
NEDD8-206ENST00000531430 TRPC4Q9UBN4 977 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 TINAGQ9UJW2 476 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD8-206ENST00000531430 NEU2Q9Y3R4 380 aa8.82□□□□□ -1
NEDD8-206ENST00000531430 SNRNP200O75643 2136 aaKnown RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 DCHS2Q6V1P9 2916 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 IGLV3-16A0A075B6K0 115 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 LOC105369274A0A096LPK9 316 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 LOC102723532A0A0G2JNH3 316 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 SLC5A10A0PJK1 596 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 VSTM2BA6NLU5 285 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 QSOX1O00391 747 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ZNHIT1O43257 154 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 PSTPIP1O43586 416 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 OR1I1O60431 355 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 SRPX2O60687 465 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 SLC19A2O60779 497 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 WISP2O76076 250 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 BMP10O95393 424 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 RPN2P04844 631 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 SERPINA7P05543 415 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 TPM1P09493 284 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 RBP3P10745 1247 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 FBLP22087 321 aaKnown RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 MSNP26038 577 aaKnown RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 PKLRP30613 574 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 KIR3DL1P43629 444 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 MARCKSL1P49006 195 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 PLOD1Q02809 727 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 TLE4Q04727 773 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ZNF33BQ06732 778 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 MSLNQ13421 630 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 TSTA3Q13630 321 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 TAZQ16635 292 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 LONRF1Q17RB8 773 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -11e-17■■□□□ 12.3
NEDD8-206ENST00000531430 ASTE1Q2TB18 679 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 CCDC38Q502W7 563 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 MFSD4BQ5TF39 518 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ATG9BQ674R7 924 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 FRMPD2BQ6IN97 320 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 DENND5AQ6IQ26 1287 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 HIBCHQ6NVY1 386 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 CDKL3Q8IVW4 592 aaPredicted RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 OR4N4Q8N0Y3 316 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ACTL9Q8TC94 416 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 STYXQ8WUJ0 223 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 PSMF1Q92530 271 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ZUFSPQ96AP4 578 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 MAGED4Q96JG8 741 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 TRIM8Q9BZR9 551 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 LUC7LQ9NQ29 371 aaKnown RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 KLHL1Q9NR64 748 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ABCF3Q9NUQ8 709 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 ABI3Q9P2A4 366 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
NEDD8-206ENST00000531430 FAM169AQ9Y6X4 670 aa8.81□□□□□ -1
NEDD8-206ENST00000531430 TRBV5-4A0A0C4DH59 114 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 CCDC162PA2VCL2 907 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 IQCF5A8MTL0 148 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 IDSB3KWA1 339 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 NPIPA5E9PKD4 350 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 F8W8V4 182 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 APOC4-APOC2K7ER74 178 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 PRAMEF2O60811 474 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 CTSVO60911 334 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 MED26O95402 600 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 CLDN14O95500 239 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 ONECUT2O95948 504 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 S1PR4O95977 384 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 APOC2P02655 101 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 TPM3P06753 285 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 ANXA5P08758 320 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 ITGAMP11215 1152 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 COX6A1P12074 109 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 CCR7P32248 378 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 MAGEA1P43355 309 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 NAP1L1P55209 391 aaKnown RBP8.8□□□□□ -1
NEDD8-206ENST00000531430 ADORA2A-AS1P86434 159 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 ITIH4Q14624 930 aa8.8□□□□□ -1
NEDD8-206ENST00000531430 DNAJC21Q5F1R6 531 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms