RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MIF4GDA9UHW6 222 aaKnown RBP17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 E7EVH7 732 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 LRRTM2O43300 516 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 PRICKLE3O43900 615 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 SLCO2B1O94956 709 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 IFNB1P01574 187 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 TSFMP43897 325 aaKnown RBP17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 TCTE1Q5JU00 501 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 WASHC2DQ5SRD0 308 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 FRMPD2BQ6IN97 320 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 LINC00696Q6ZRV3 163 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 PRSS58Q8IYP2 241 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 MIPEPQ99797 713 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 CATSPERZQ9NTU4 200 aa17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 STOX2Q9P2F5 926 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-206ENST00000531405 SCN2AQ99250 2005 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 DCHS2Q6V1P9 2916 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 FITM1A5D6W6 292 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 VSTM2BA6NLU5 285 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 ENO4A6NNW6 628 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 LIASO43766 372 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 FDFT1P37268 417 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 ZNF75DP51815 510 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 TMED2Q15363 201 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 OASLQ15646 514 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 YOD1Q5VVQ6 348 aaPredicted RBP17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 C1QL3Q5VWW1 255 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 SYCE1Q8N0S2 351 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 CATSPER1Q8NEC5 780 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 FAR1Q8WVX9 515 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 C8orf44Q96CB5 159 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 CRB3Q9BUF7 120 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 EPS8L2Q9H6S3 715 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 RAB6BQ9NRW1 208 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 SEMA3GQ9NS98 782 aa17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 TSR3Q9UJK0 312 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 NXT1Q9UKK6 140 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 TTC7AQ9ULT0 858 aaPredicted RBP17.61■□□□□ 0.41
SSSCA1-206ENST00000531405 LOC105369274A0A096LPK9 316 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 LOC102723532A0A0G2JNH3 316 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 A0A0J9YVX5 310 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 HYKKA2RU49 373 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 PRMT5O14744 637 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 KLHL18O94889 574 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 PPARGP37231 505 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 YBX1P67809 324 aaKnown RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 KLC1Q07866 573 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 FAM214AQ32MH5 1076 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 PTRHD1Q6GMV3 140 aaKnown RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 NLRP9Q7RTR0 991 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 OR4N4Q8N0Y3 316 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 PPHLN1Q8NEY8 458 aaKnown RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 SKA2Q8WVK7 121 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 C1orf54Q8WWF1 131 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 ZUFSPQ96AP4 578 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 HES6Q96HZ4 224 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 DESI2Q9BSY9 194 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 ZNF160Q9HCG1 818 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 CHRAC1Q9NRG0 131 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 ZC3H7BQ9UGR2 993 aaKnown RBP17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 ANAPC5Q9UJX4 755 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 OTOGQ6ZRI0 2925 aa17.6■□□□□ 0.41
SSSCA1-206ENST00000531405 TACC2O95359 2948 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 TARM1B6A8C7 271 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 CD3EAPO15446 510 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 C1orf105O95561 183 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 EIF2S1P05198 315 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 APRTP07741 180 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 EDN3P14138 238 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 STIP1P31948 543 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 CRADDP78560 199 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 SNX1Q13596 522 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 TLR1Q15399 786 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 AARS2Q5JTZ9 985 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 B3GNTL1Q67FW5 361 aaPredicted RBP17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 TTC23LQ6PF05 361 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 CNSTQ6PJW8 725 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 ISLR2Q6UXK2 745 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 TICAM1Q8IUC6 712 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 OR2L3Q8NG85 312 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 GSDMBQ8TAX9 411 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 STT3BQ8TCJ2 826 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 RAD51AP1Q96B01 352 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 RAB11FIP5Q9BXF6 653 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 P2RY12Q9H244 342 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 ZNF304Q9HCX3 659 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 ENAMQ9NRM1 1142 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 ZNF148Q9UQR1 794 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 CAPN6Q9Y6Q1 641 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 FAM169AQ9Y6X4 670 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 PCNX1Q96RV3 2341 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 SCN3AQ9NY46 2000 aa17.59■□□□□ 0.41
SSSCA1-206ENST00000531405 FBN2P35556 2912 aa17.58■□□□□ 0.41
SSSCA1-206ENST00000531405 A0A1W2PPV9 198 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 FFAR3O14843 346 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 GPR42O15529 346 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 SRPX2O60687 465 aaPredicted RBP17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 ZG16O60844 167 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 ZGLP1P0C6A0 271 aa17.58■□□□□ 0.4
SSSCA1-206ENST00000531405 ZSCAN5DPP0CG00 497 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms