RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	ENAM	Q9NRM1	1142 aa		11.53	□□□□□ -0.56
CSRP1-213	ENST00000530120	IFT80	Q9P2H3	777 aa	Predicted RBP	11.53	□□□□□ -0.56
CSRP1-213	ENST00000530120	OSGIN2	Q9Y236	505 aa		11.53	□□□□□ -0.56
CSRP1-213	ENST00000530120	TDRKH	Q9Y2W6	561 aa	Known RBP	11.53	□□□□□ -0.56
CSRP1-213	ENST00000530120	SEC16A	O15027	2179 aa		11.52	□□□□□ -0.56
CSRP1-213	ENST00000530120	CCDC162P	A2VCL2	907 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	DDX3Y	O15523	660 aa	Known RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	ZG16	O60844	167 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	ALB	P02768	609 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	APOA4	P06727	396 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	PRSS56	P0CW18	603 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	PIM1	P11309	404 aa	Predicted RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	ITGA3	P26006	1051 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	TTPA	P49638	278 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	PRAME	P78395	509 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	MYBPC3	Q14896	1274 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	NAA25	Q14CX7	972 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	OASL	Q15646	514 aa	Known RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	KRTAP21-3	Q3LHN1	58 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	NKAIN1	Q4KMZ8	207 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	FASTKD1	Q53R41	847 aa	Known RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	TCTE1	Q5JU00	501 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	TSTD2	Q5T7W7	516 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	C4orf22	Q6V702	233 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	PPP1R21	Q6ZMI0	780 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	LRRC6	Q86X45	466 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	RAB42	Q8N4Z0	105 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	OR52K1	Q8NGK4	314 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	OR4L1	Q8NH43	312 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	FLVCR1-AS1	Q8TAF5	88 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.52	□□□□□ -0.57	4e-7	■■■■■ 58.1
CSRP1-213	ENST00000530120	CAVIN3	Q969G5	261 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	PTER	Q96BW5	349 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	VPS50	Q96JG6	964 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	WDR54	Q9H977	334 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	MRM3	Q9HC36	420 aa	Known RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	FAM60A	Q9NP50	221 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	IRAK4	Q9NWZ3	460 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	COPG2	Q9UBF2	871 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	ANAPC5	Q9UJX4	755 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	NXT1	Q9UKK6	140 aa	Known RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	PRSS21	Q9Y6M0	314 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120	CNTRL	Q7Z7A1	2325 aa		11.52	□□□□□ -0.57
CSRP1-213	ENST00000530120		A0A1B0GX78	115 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	ISM1	B1AKI9	464 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	KPNA5	O15131	536 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	LIAS	O43766	372 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	FTCD	O95954	541 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	GOT2	P00505	430 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	OTX2	P32243	289 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	RPS6KA1	Q15418	735 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	ZIC1	Q15915	447 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	CYP2A13	Q16696	494 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	DEFB110	Q30KQ9	67 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	MLIP	Q5VWP3	458 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	ARMC3	Q5W041	872 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	MRPL14	Q6P1L8	145 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	TTC23L	Q6PF05	361 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	TRIM73	Q86UV7	250 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	IFT20	Q8IY31	132 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	GALNT16	Q8N428	558 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	DNAJC22	Q8N4W6	341 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	ZNF655	Q8N720	491 aa	Predicted RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	CCDC89	Q8N998	374 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	EIF1AD	Q8N9N8	165 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PPHLN1	Q8NEY8	458 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	GSDMB	Q8TAX9	411 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	HDAC10	Q969S8	669 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PANX3	Q96QZ0	392 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	KLHL25	Q9H0H3	589 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	SLC26A1	Q9H2B4	701 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	EIF2B3	Q9NR50	452 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PIH1D1	Q9NWS0	290 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	SPHK1	Q9NYA1	384 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	IL1RAPL1	Q9NZN1	696 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PAK5	Q9P286	719 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	ADAM21	Q9UKJ8	722 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PTRH2	Q9Y3E5	179 aa	Known RBP	11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	TCAF1	Q9Y4C2	921 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	NAV3	Q8IVL0	2385 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	MYO7B	Q6PIF6	2116 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	TACC2	O95359	2948 aa		11.51	□□□□□ -0.57
CSRP1-213	ENST00000530120	PCM1	Q15154	2024 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120		A0A1B0GUH1	482 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	OR51F1	A6NGY5	319 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	PRMT5	O14744	637 aa	Predicted RBP	11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	GPC4	O75487	556 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	SLCO2B1	O94956	709 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	ONECUT2	O95948	504 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	IFNB1	P01574	187 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	CBSL	P0DN79	551 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	ITGAX	P20702	1163 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	MAG	P20916	626 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	PEBP1	P30086	187 aa	Known RBP	11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	CBS	P35520	551 aa		11.5	□□□□□ -0.57
CSRP1-213	ENST00000530120	CCNF	P41002	786 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms