RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 ABHD2P08910 425 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 CYP2A7P20853 494 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 CSTF2P33240 577 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC84-205ENST00000528088 EIF2S3P41091 472 aaKnown RBP10.66□□□□□ -0.7
CCDC84-205ENST00000528088 ARL4DP49703 201 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 RAB28P51157 221 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 PDX1P52945 283 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 RAB10P61026 200 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 GBX1Q14549 363 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 TAF1BQ53T94 588 aaPredicted RBP10.66□□□□□ -0.7
CCDC84-205ENST00000528088 C3orf38Q5JPI3 329 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 WDR93Q6P2C0 686 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 FRA10AC1Q70Z53 315 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 CMC1Q7Z7K0 106 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 NKAPQ8N5F7 415 aaKnown RBP10.66□□□□□ -0.7
CCDC84-205ENST00000528088 NSUN5Q96P11 429 aaKnown RBP10.66□□□□□ -0.7
CCDC84-205ENST00000528088 IL17FQ96PD4 163 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 RAB11FIP5Q9BXF6 653 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 PARD6BQ9BYG5 372 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 TRIM54Q9BYV2 358 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 TFB2MQ9H5Q4 396 aaKnown RBP10.66□□□□□ -0.7
CCDC84-205ENST00000528088 ABCF3Q9NUQ8 709 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 OGFRQ9NZT2 677 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 ICKQ9UPZ9 632 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 PCM1Q15154 2024 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
CCDC84-205ENST00000528088 IGHV5-10-1A0A0J9YXX1 117 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 PIPSLA2A3N6 862 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 KRT87PA6NCN2 255 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SMIM23A6NLE4 172 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 ARHGEF33A8MVX0 844 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 MATN2O00339 956 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 BTN3A1O00481 513 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 MATN4O95460 622 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 C1QAP02745 245 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 C8GP07360 202 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 HIST1H2AGP0C0S8 130 aaPredicted RBP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 JMJD7P0C870 316 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 ZNF37AP17032 561 aaPredicted RBP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 HIST1H2ADP20671 130 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 CD9P21926 228 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 CDH3P22223 829 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SEPHS1P49903 392 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SERPINB8P50452 374 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SERPINB9P50453 376 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 PPP1CAP62136 330 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 GABREP78334 506 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 TIAL1Q01085 375 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 PLAURQ03405 335 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 LGSNQ5TDP6 509 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 CACHD1Q5VU97 1274 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 EMBQ6PCB8 327 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 WDR74Q6RFH5 385 aaPredicted RBP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 TMPRSS9Q7Z410 1059 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 TBC1D1Q86TI0 1168 aaPredicted RBP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 FAM129CQ86XR2 697 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 CEP97Q8IW35 865 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 MCOLN3Q8TDD5 553 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SLC44A1Q8WWI5 657 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 HIST1H2AHQ96KK5 128 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 NRTNQ99748 197 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 CMKLR1Q99788 373 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 HIST1H2AJQ99878 128 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 H2AFJQ9BTM1 129 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 UNKQ9C0B0 810 aaKnown RBP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 POPDC3Q9HBV1 291 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 RRAGDQ9NQL2 400 aaPredicted RBP10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SOHLH2Q9NX45 425 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 TLK1Q9UKI8 766 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 ENTPD2Q9Y5L3 495 aa10.65□□□□□ -0.7
CCDC84-205ENST00000528088 SNRNP200O75643 2136 aaKnown RBP10.64□□□□□ -0.71
CCDC84-205ENST00000528088 CCDC187A0A096LP49 1063 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 NPEPPSL1A6NEC2 478 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 C2orf74A8MZ97 194 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 RASGRF2O14827 1237 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 PSIP1O75475 530 aaKnown RBP10.64□□□□□ -0.71
CCDC84-205ENST00000528088 TUBBP07437 444 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 CCDC166P0CW27 439 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 THRAP10827 490 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 CRABP2P29373 138 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 TYK2P29597 1187 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 PKLRP30613 574 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 CFHR1Q03591 330 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 IFFO1Q0D2I5 559 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 SP140Q13342 867 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 TRA2AQ13595 282 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC84-205ENST00000528088 PWP1Q13610 501 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 SPRED3Q2MJR0 410 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 TBC1D25Q3MII6 688 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 CCSMST1Q4G0I0 132 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.64□□□□□ -0.71
CCDC84-205ENST00000528088 THEMIS2Q5TEJ8 643 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 ZNF574Q6ZN55 896 aaPredicted RBP10.64□□□□□ -0.71
CCDC84-205ENST00000528088 RAB11FIP2Q7L804 512 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 SLITRK4Q8IW52 837 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 SYTL1Q8IYJ3 562 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 FBXO39Q8N4B4 442 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 OR9A1PQ8NGU1 263 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 FGF11Q92914 225 aa10.64□□□□□ -0.71
CCDC84-205ENST00000528088 GRAMD1AQ96CP6 724 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms