RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CHRM3P20309 590 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 ALAS2P22557 587 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 FMO4P31512 558 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CXCR5P32302 372 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 GPS1Q13098 491 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 GBX1Q14549 363 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 ARHGAP19Q14CB8 494 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CYP2A13Q16696 494 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 DCAF10Q5QP82 559 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 FCRL6Q6DN72 434 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 NEPROQ6NW34 567 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CTAGE6Q86UF2 777 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CTAGE4Q8IX94 777 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 LMNTD2Q8IXW0 634 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 RASGEF1CQ8N431 466 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 TTC29Q8NA56 475 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CPT1CQ8TCG5 803 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 VPS50Q96JG6 964 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 IL17FQ96PD4 163 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 NUDT9Q9BW91 350 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 SLC26A1Q9H2B4 701 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 WDR54Q9H977 334 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 XAB2Q9HCS7 855 aaKnown RBP13.62□□□□□ -0.23
CAPN1-212ENST00000527887 FAM114A2Q9NRY5 505 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 NXT1Q9UKK6 140 aaKnown RBP13.62□□□□□ -0.23
CAPN1-212ENST00000527887 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 ZNF839A8K0R7 811 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 DSCR3O14972 297 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 SORBS2O94875 1100 aaKnown RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 KRT14P02533 472 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 PKMP14618 531 aaKnown RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 ITGAXP20702 1163 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 GRIA3P42263 894 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 MYBPC3Q14896 1274 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 TTLL9Q3SXZ7 439 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 ANKRD20A4Q4UJ75 823 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 CTSL3PQ5NE16 218 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 FAM69BQ5VUD6 431 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 JMJD6Q6NYC1 403 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 CASC4Q6P4E1 433 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 NEK10Q6ZWH5 1172 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 CILP2Q8IUL8 1156 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 C2orf73Q8N5S3 287 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 TM9SF4Q92544 642 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 PNPLA2Q96AD5 504 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 SELENOSQ9BQE4 189 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 ATP13A2Q9NQ11 1180 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 SLAMF7Q9NQ25 335 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 CUTCQ9NTM9 273 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
CAPN1-212ENST00000527887 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 MAP4K5Q9Y4K4 846 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 NFS1Q9Y697 457 aa13.61□□□□□ -0.23
CAPN1-212ENST00000527887 TCRBV7S3A2A0A539 114 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 A6NL46 340 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 E5RI56 91 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 AGPSO00116 658 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CATP04040 527 aaKnown RBP13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CTSBP07858 339 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 ERGP11308 486 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 MMP11P24347 488 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CMPK1P30085 196 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 EMP3P54852 163 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 DHX34Q14147 1143 aaKnown RBP13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CYP1B1Q16678 543 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 NADK2Q4G0N4 442 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CES3Q6UWW8 571 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 IGFL3Q6UXB1 125 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 FAM20CQ8IXL6 584 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 GALNT16Q8N428 558 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 OR2L3Q8NG85 312 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 OR2A1Q8NGT9 310 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 OR9A1PQ8NGU1 263 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CALML6Q8TD86 181 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 SLC22A11Q9NSA0 550 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 P4HTMQ9NXG6 502 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 KLHL20Q9Y2M5 609 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 CRYL1Q9Y2S2 319 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 COMMD10Q9Y6G5 202 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 SPTBP11277 2137 aa13.6□□□□□ -0.23
CAPN1-212ENST00000527887 GOLGA8KD6RF30 607 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 GOLGA8TH3BQL2 631 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 NIPSNAP2O75323 286 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 AVILO75366 819 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 PSIP1O75475 530 aaKnown RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 UMODP07911 640 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 ENO3P13929 434 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 COILP38432 576 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 RELAQ04206 551 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 AIMP2Q13155 320 aaKnown RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 THOC5Q13769 683 aaKnown RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 TRIP13Q15645 432 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 CNSTQ6PJW8 725 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 CCDC137Q6PK04 289 aaKnown RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 CENPUQ71F23 418 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 PPP1R32Q7Z5V6 425 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms