RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ZBTB14O43829 449 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 GRIA3P42263 894 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 TIAL1Q01085 375 aaKnown RBP eCLIP25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 LCN10Q6JVE6 187 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 RHBDD2Q6NTF9 364 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 SYVN1Q86TM6 617 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 FBXO36Q8NEA4 188 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 OR2L3Q8NG85 312 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 APOBEC4Q8WW27 367 aaKnown RBP25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 MIPEPQ99797 713 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 NLNQ9BYT8 704 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 IRAK4Q9NWZ3 460 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 CORO1CQ9ULV4 474 aaPredicted RBP25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 SRPK3Q9UPE1 567 aa25.33■■□□□ 1.65
TSPAN4-217ENST00000527644 AGXTP21549 392 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 MCM3P25205 808 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 PSMB5P28074 263 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 RGS4P49798 205 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 PNLIPRP1P54315 467 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 POLE2P56282 527 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 NAA25Q14CX7 972 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 RBM20Q5T481 1227 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 SPNS2Q8IVW8 549 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 ZNF655Q8N720 491 aaPredicted RBP25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 DPH5Q9H2P9 285 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 SLC17A6Q9P2U8 582 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 POLHQ9Y253 713 aa25.32■■□□□ 1.64
TSPAN4-217ENST00000527644 CDC14CA4D256 554 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 CTSBP07858 339 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 FURINP09958 794 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 CMPK1P30085 196 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 CDKN2DP55273 166 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 FASTKD3Q14CZ7 662 aaKnown RBP25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 PTCHD3Q3KNS1 767 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 ZNF385CQ66K41 422 aaPredicted RBP25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 DUPD1Q68J44 220 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 UBE2R2Q712K3 238 aaPredicted RBP25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 ZNF572Q7Z3I7 529 aaPredicted RBP25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 PIWIL4Q7Z3Z4 852 aaKnown RBP25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 PROKR1Q8TCW9 393 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 EEF1AKMT1Q8WVE0 214 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 MOCS1Q9NZB8 636 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 TUBD1Q9UJT1 453 aa25.31■■□□□ 1.64
TSPAN4-217ENST00000527644 SLC16A8O95907 504 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 SYF2O95926 243 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 CAPN1P07384 714 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 RPA3P35244 121 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 RPS18P62269 152 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 MGAT5Q09328 741 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 UGT8Q16880 541 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 PAQR3Q6TCH7 311 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 ZBED8Q8IZ13 594 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 ENDOVQ8N8Q3 282 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 ZNF480Q8WV37 535 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 C17orf62Q9BQA9 187 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 NDC1Q9BTX1 674 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 ZFATQ9P243 1243 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 VWA7Q9Y334 891 aa25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 UTP11Q9Y3A2 253 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 FASNP49327 2511 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-217ENST00000527644 C9J4A7 227 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 KCNAB2Q13303 367 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 TCTE1Q5JU00 501 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 FAM198BQ6UWH4 519 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 SUSD1Q6UWL2 747 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 GPATCH11Q8N954 259 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 DLG3Q92796 817 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 GBP5Q96PP8 586 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 ACAT2Q9BWD1 397 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 RAB17Q9H0T7 212 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 ENAMQ9NRM1 1142 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 TXLNGQ9NUQ3 528 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 SNX7Q9UNH6 387 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 KCNMB2Q9Y691 235 aa25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 TLN1Q9Y490 2541 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-217ENST00000527644 E7ENX8 843 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 EIF3HO15372 352 aaKnown RBP eCLIP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 SRPX2O60687 465 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 CTSVO60911 334 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 C8GP07360 202 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 ARSFP54793 590 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 DCDP81605 110 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 TAP2Q03519 686 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 CKAP4Q07065 602 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 COL9A2Q14055 689 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 NCF4Q15080 339 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 HECTD2Q5U5R9 776 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 FAM45BPQ6NSW5 357 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 PALM2Q8IXS6 379 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 MYO1HQ8N1T3 1032 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 FAM45AQ8TCE6 357 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 MCOLN3Q8TDD5 553 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 PYROXD1Q8WU10 500 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 THAP4Q8WY91 577 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 C16orf45Q96MC5 204 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 ZNF285Q96NJ3 590 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 SELENOSQ9BQE4 189 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 DHRS4Q9BTZ2 278 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 MRPS30Q9NP92 439 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 STARD5Q9NSY2 213 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms