RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 HMGB1P09429 215 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 TNFAIP3P21580 790 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 PON1P27169 355 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF415Q09FC8 603 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 BIRC3Q13489 604 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 TMEM132DQ14C87 1099 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 ASTE1Q2TB18 679 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 FAM182AQ5T1J6 154 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 ATAD3CQ5T2N8 411 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 RNF130Q86XS8 419 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 CEP57L1Q8IYX8 460 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 PRR22Q8IZ63 422 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 OR5T2Q8NGG2 359 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 MRAPQ8TCY5 172 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 AGAP11Q8TF27 550 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 POMGNT1Q8WZA1 660 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 BADQ92934 168 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF285Q96NJ3 590 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 LPAR4Q99677 370 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 NAALAD2Q9Y3Q0 740 aa1.93□□□□□ -2.1
ECHDC1-219ENST00000526299 TDRD6O60522 2096 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 LIPT2A6NK58 231 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 G3V2L1 256 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 HSPA1AP0DMV8 641 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 HSPA1BP0DMV9 641 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 CCR9P51686 369 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 SUOXP51687 545 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 PRAMEP78395 509 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 IRX4P78413 519 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF146Q15072 292 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 PTPN14Q15678 1187 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 EXT1Q16394 746 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 C2orf83Q53S99 150 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 KLHL35Q6PF15 583 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 SARM1Q6SZW1 724 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 LEKR1Q6ZMV7 388 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 TMPRSS11FQ6ZWK6 438 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 NOL8Q76FK4 1167 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 MCEMP1Q8IX19 187 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 PAPD5Q8NDF8 572 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 PHYHIPLQ96FC7 376 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 C2orf48Q96LS8 159 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 CMTM3Q96MX0 182 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 SDHCQ99643 169 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 SRSF8Q9BRL6 282 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 SH2D4AQ9H788 454 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 MTHFD2LQ9H903 347 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 TRPV4Q9HBA0 871 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 LARSQ9P2J5 1176 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 SESN1Q9Y6P5 492 aa1.92□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF541Q9H0D2 1346 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 ARID2Q68CP9 1835 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 FAM168BA1KXE4 195 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 FPGTO14772 594 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 TEX28O15482 410 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 SH3BGRLO75368 114 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 MED24O75448 989 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 CLEC3BP05452 202 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 SMIM18P0DKX4 95 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF32P17041 273 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 CDH2P19022 906 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 AOC1P19801 751 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 PTGER4P35408 488 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 PPM1FP49593 454 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 ATP4BP51164 291 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 CDK3Q00526 305 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 LMOD3Q0VAK6 560 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 RUNX3Q13761 415 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 HERC4Q5GLZ8 1057 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 AGAP7PQ5VUJ5 663 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 GARNL3Q5VVW2 1013 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 NUDT13Q86X67 352 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 SLC37A3Q8NCC5 494 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 CSNK1G2-AS1Q8NCQ2 148 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 OR52B6Q8NGF0 335 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 SLC39A8Q9C0K1 460 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 ZNF581Q9P0T4 197 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 LNPEPQ9UIQ6 1025 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 HACL1Q9UJ83 578 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 CORO1CQ9ULV4 474 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 GRIP1Q9Y3R0 1128 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 TRIM17Q9Y577 477 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 R4GN57 208 aa1.91□□□□□ -2.1
ECHDC1-219ENST00000526299 A0A1W2PQ72 361 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 A0A1W2PR77 199 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 FRMD3A2A2Y4 597 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 K7EQD1 137 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 ZWINTO95229 277 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 PCP11498 1178 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 MMP9P14780 707 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 PPARGP37231 505 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 SLC9A3P48764 834 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 TMF1P82094 1093 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 FKBP3Q00688 224 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 NR1D2Q14995 579 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 C3P1Q6ZMU1 363 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 CATSPER3Q86XQ3 398 aa1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 MAML2Q8IZL2 1156 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-219ENST00000526299 OR7A2PQ8NGA2 310 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms