RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 KHKP50053 298 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 TAS2R39P59534 338 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 TANGO2Q6ICL3 276 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 DNAJB14Q8TBM8 379 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 MECRQ9BV79 373 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 EBPLQ9BY08 206 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 ARMCX1Q9P291 453 aa16.64■□□□□ 0.26
BEST1-203ENST00000524877 A8MUA0 341 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 ERI3O43414 337 aaKnown RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 CXCL10P02778 98 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 CHRM1P11229 460 aaPredicted RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 COX4I1P13073 169 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 MPSTP25325 297 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 EPHA3P29320 983 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 MPIP34949 423 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 TMEM130Q8N3G9 435 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 LRRN4CLQ8ND94 238 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 GRPEL2Q8TAA5 225 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 TMEM125Q96AQ2 219 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 DGCR14Q96DF8 476 aaKnown RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 GFM1Q96RP9 751 aaKnown RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 KCNH6Q9H252 994 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 TBC1D17Q9HA65 648 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 CYTH4Q9UIA0 394 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 MTRF1O75570 445 aaKnown RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 SOX9P48436 509 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 HSF5Q4G112 596 aaPredicted RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 MPP7Q5T2T1 576 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 COX18Q8N8Q8 333 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 SPAG4Q9NPE6 437 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 ZNF224Q9NZL3 707 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 CNTN6Q9UQ52 1028 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 HRH2P25021 359 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 CLCN4P51793 760 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 KIAA0319Q5VV43 1072 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 POMZP3Q6PJE2 187 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 RASSF5Q8WWW0 418 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 SLC5A11Q8WWX8 675 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 ZBED6CLQ96FA7 236 aaPredicted RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 LAMB2P55268 1798 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 OR6C74A6NCV1 312 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 ADAM12O43184 909 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 GJA4P35212 333 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 PXNP49023 591 aaPredicted RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 POLR2JP52435 117 aaKnown RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 BNIP1Q12981 228 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 TRMT5Q32P41 509 aaKnown RBP16.64■□□□□ 0.25
BEST1-203ENST00000524877 FBXO48Q5FWF7 155 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 CHCHD4Q8N4Q1 142 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 TMEM156Q8N614 296 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 NAT8LQ8N9F0 302 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 XAGE5Q8WWM1 108 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 EPB41L4BQ9H329 900 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 SLC2A6Q9UGQ3 507 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 PLCL2Q9UPR0 1127 aa16.64■□□□□ 0.25
BEST1-203ENST00000524877 ACRV1P26436 265 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 PITX1P78337 314 aaPredicted RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 NFKB2Q00653 900 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 TRAP1Q12931 704 aaKnown RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 ZNF542PQ5EBM4 170 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 GPR65Q8IYL9 337 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 SAR1AQ9NR31 198 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 PNPOQ9NVS9 261 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 COL5A3P25940 1745 aaPredicted RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 CAPN8A6NHC0 703 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 K7ERQ8 282 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 SDC3O75056 442 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 BMP7P18075 431 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 DPYSQ14117 519 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 KCNJ11Q14654 390 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 TCHHL1Q5QJ38 904 aaPredicted RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 FAM220AQ7Z4H9 259 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 PLEKHG4BQ96PX9 1271 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 DUSP23Q9BVJ7 150 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 HSD3B7Q9H2F3 369 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 PREBQ9HCU5 417 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 C1orf109Q9NX04 203 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 SLC17A7Q9P2U7 560 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 A0A1W2PQ72 361 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 NPHS1O60500 1241 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 ITGB7P26010 798 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 PTX3P26022 381 aaPredicted RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 STC1P52823 247 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 EPS8Q12929 822 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 HNRNPA1L2Q32P51 320 aaKnown RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 ZBTB49Q6ZSB9 765 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 P4HA3Q7Z4N8 544 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 ATP6V1C2Q8NEY4 427 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 LENG8Q96PV6 779 aaPredicted RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 SMAD5Q99717 465 aaKnown RBP16.63■□□□□ 0.25
BEST1-203ENST00000524877 MLXQ9UH92 298 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 MYRFQ9Y2G1 1151 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 KCTD3Q9Y597 815 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 SUV39H1O43463 412 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 NCBP2P52298 156 aaKnown RBP eCLIP16.63■□□□□ 0.25
BEST1-203ENST00000524877 UGT2B15P54855 530 aa16.63■□□□□ 0.25
BEST1-203ENST00000524877 WNT7BP56706 349 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms