RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	SLC1A2	P43004	574 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	PGD	P52209	483 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	FRMPD2B	Q6IN97	320 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	TTLL10	Q6ZVT0	673 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	NEK10	Q6ZWH5	1172 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	MED25	Q71SY5	747 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	MRGPRE	Q86SM8	312 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	PPIL6	Q8IXY8	311 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	FDCSP	Q8NFU4	85 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	OR9A1P	Q8NGU1	263 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	OR2Y1	Q8NGV0	311 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	MAGEC3	Q8TD91	643 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	GRK7	Q8WTQ7	553 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	NUDT9	Q9BW91	350 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	IRAK4	Q9NWZ3	460 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	SPATA7	Q9P0W8	599 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	IFT80	Q9P2H3	777 aa	Predicted RBP	11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	KLHL42	Q9P2K6	505 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	GPN3	Q9UHW5	284 aa	Predicted RBP	11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	PLAA	Q9Y263	795 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	VPS9D1	Q9Y2B5	631 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	PADI2	Q9Y2J8	665 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	PTRH2	Q9Y3E5	179 aa	Known RBP	11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	MAD1L1	Q9Y6D9	718 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	FAM169A	Q9Y6X4	670 aa		11.86	□□□□□ -0.51
VEGFA-223	ENST00000523125	HECTD1	Q9ULT8	2610 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	LOC105369274	A0A096LPK9	316 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	LOC102723532	A0A0G2JNH3	316 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125		A0A1B0GX78	115 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	CTAGE9	A4FU28	777 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	FITM1	A5D6W6	292 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	USP27X	A6NNY8	438 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125		E5RI56	91 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	GFY	I3L273	518 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	DSCR3	O14972	297 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	HAUS5	O94927	633 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	CD63	P08962	238 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	ALAS2	P22557	587 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	IVD	P26440	423 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	ARSF	P54793	590 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	MLLT10	P55197	1068 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	CUL1	Q13616	776 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	THOC5	Q13769	683 aa	Known RBP	11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	LONRF1	Q17RB8	773 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	NADK2	Q4G0N4	442 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	MSS51	Q4VC12	460 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	TCTE1	Q5JU00	501 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	FBXO42	Q6P3S6	717 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	SUSD1	Q6UWL2	747 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	CYHR1	Q6ZMK1	362 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	COX15	Q7KZN9	410 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	OVCH1	Q7RTY7	1134 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	PPP1R32	Q7Z5V6	425 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	RAB43	Q86YS6	212 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	OR4N4	Q8N0Y3	316 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	RAB42	Q8N4Z0	105 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	DTWD1	Q8N5C7	304 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	ASB11	Q8WXH4	323 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	DLG3	Q92796	817 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	KCNJ9	Q92806	393 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	SLCO2A1	Q92959	643 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	MIB2	Q96AX9	1013 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	PTER	Q96BW5	349 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	PKP4	Q99569	1192 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	SELENOS	Q9BQE4	189 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	DDX47	Q9H0S4	455 aa	Known RBP	11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	SYNPO2L	Q9H987	977 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	SLC6A20	Q9NP91	592 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	CUTC	Q9NTM9	273 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	NDOR1	Q9UHB4	597 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	PCYOX1	Q9UHG3	505 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	FBXO5	Q9UKT4	447 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	DHRS7	Q9Y394	339 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	DOPEY2	Q9Y3R5	2298 aa		11.85	□□□□□ -0.51
VEGFA-223	ENST00000523125	PTPN13	Q12923	2485 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	IGKV1-8	A0A0C4DH67	115 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	GOLGA6L10	A0A0M3HER8	536 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	OR2A25	A4D2G3	310 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125		A6NL46	340 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	MASP2	O00187	686 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	DNALI1	O14645	258 aa	Predicted RBP	11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	SRPX2	O60687	465 aa	Predicted RBP	11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	BANF1	O75531	89 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	SLC16A8	O95907	504 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	FOLR3	P41439	243 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	CD97	P48960	835 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	RRAD	P55042	308 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	VSX2	P58304	361 aa	Predicted RBP	11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	MPP1	Q00013	466 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	PTK6	Q13882	451 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	GRM7	Q14831	915 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	ARHGAP19	Q14CB8	494 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	PPP1R7	Q15435	360 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	HSP90AA5P	Q58FG0	334 aa		11.84	□□□□□ -0.51
VEGFA-223	ENST00000523125	DCAF10	Q5QP82	559 aa		11.84	□□□□□ -0.51

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