RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PRAMEF4O60810 478 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 KATNA1O75449 491 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 EPB42P16452 691 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 POLR2CP19387 275 aaPredicted RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 MPSTP25325 297 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 CBX1P83916 185 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 PRAMEF9Q5VWM5 478 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 ZCCHC8Q6NZY4 707 aaKnown RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 DUSP23Q9BVJ7 150 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 RAB11FIP5Q9BXF6 653 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 RABEP2Q9H5N1 569 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 STN1Q9H668 368 aaKnown RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 FGFR1OP2Q9NVK5 253 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 ZNF225Q9UK10 706 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 PADI4Q9UM07 663 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 U3KQA8 63 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 ZNF839A8K0R7 811 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 RHPN2P1A8MT19 583 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 KDM1AO60341 852 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 CHRM5P08912 532 aaPredicted RBP12.93□□□□□ -0.34
CLK4-210ENST00000522136 ALPPL2P10696 532 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 ARL1P40616 181 aaPredicted RBP12.93□□□□□ -0.34
CLK4-210ENST00000522136 SF3A3Q12874 501 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■□□ 17.9
CLK4-210ENST00000522136 PRAMEF13Q5VWM6 474 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 PRR23CQ6ZRP0 262 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 ZNF438Q7Z4V0 828 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 SYVN1Q86TM6 617 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 RBM12BQ8IXT5 1001 aaKnown RBP12.93□□□□□ -0.34
CLK4-210ENST00000522136 ZNF781Q8N8C0 355 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 HMGCLL1Q8TB92 370 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 NEIL2Q969S2 332 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 ATP6V1E2Q96A05 226 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
CLK4-210ENST00000522136 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 SLC38A3Q99624 504 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 MID1IP1Q9NPA3 183 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 DNAAF2Q9NVR5 837 aaKnown RBP12.93□□□□□ -0.34
CLK4-210ENST00000522136 PNPOQ9NVS9 261 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 OR6C2Q9NZP2 312 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 ZDHHC2Q9UIJ5 367 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
CLK4-210ENST00000522136 ISM1B1AKI9 464 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 CASC3O15234 703 aaKnown RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 PRICKLE3O43900 615 aaPredicted RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 EDF1O60869 148 aaKnown RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 KITP10721 976 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 ALDH4A1P30038 563 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 ERVPABLB-1P60509 514 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 CDC16Q13042 620 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 LCP2Q13094 533 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 CATSPEREQ5SY80 951 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 METTL2BQ6P1Q9 378 aaKnown RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 CUZD1Q86UP6 607 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 Q8N9G6 341 aaPredicted RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 OR2A1Q8NGT9 310 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 AGAP11Q8TF27 550 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 RSC1A1Q92681 617 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 THOC1Q96FV9 657 aaKnown RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 MIPEPQ99797 713 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 EDEM2Q9BV94 578 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 MARCOQ9UEW3 520 aaPredicted RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 UNC13CQ8NB66 2214 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 WDR87Q6ZQQ6 2873 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 EP300Q09472 2414 aaPredicted RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 PIPSLA2A3N6 862 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 CPED1A4D0V7 1026 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 TMEM233B4DJY2 109 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 E7EQ34 232 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 OR4F21O95013 312 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 MLYCDO95822 493 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 ZNF883P0CG24 379 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 GLB1P16278 677 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 TGM1P22735 817 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 SERPINB5P36952 375 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 CCNG1P51959 295 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 FOXA1P55317 472 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 OR1D5P58170 312 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 PPP1CAP62136 330 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 TRAF3Q13114 568 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 CSRP2Q16527 193 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 NKAIN2Q5VXU1 208 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 LETMD1Q6P1Q0 360 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 GUSBP11Q6P575 273 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 AVL9Q8NBF6 648 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 OR4F6Q8NGB9 312 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 SETD7Q8WTS6 366 aaKnown RBP12.92□□□□□ -0.34
CLK4-210ENST00000522136 CHMP6Q96FZ7 201 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 PPM1MQ96MI6 270 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 KCNA7Q96RP8 456 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 TRMOQ9BU70 441 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 FAM107BQ9H098 131 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 UCK1Q9HA47 277 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 HRASLS2Q9NWW9 162 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 RNF11Q9Y3C5 154 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 FIS1Q9Y3D6 152 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 KCNE2Q9Y6J6 123 aa12.92□□□□□ -0.34
CLK4-210ENST00000522136 GSAPA4D1B5 854 aa12.91□□□□□ -0.34
CLK4-210ENST00000522136 GMNCA6NCL1 334 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms