RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 KCNE4Q8WWG9 221 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 TMEM190Q8WZ59 177 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 PROX1Q92786 737 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 EXT2Q93063 718 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 KATNB1Q9BVA0 655 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 GTPBP2Q9BX10 602 aaKnown RBP4.6□□□□□ -1.67
SKP1-208ENST00000521216 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
SKP1-208ENST00000521216 PPANQ9NQ55 473 aaKnown RBP4.6□□□□□ -1.67
SKP1-208ENST00000521216 ZNF71Q9NQZ8 489 aaPredicted RBP4.6□□□□□ -1.67
SKP1-208ENST00000521216 IGHV4-4A0A075B6R2 117 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 KLF11O14901 512 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 EPHB6O15197 1021 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 KRT86O43790 486 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 EDIL3O43854 480 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 RPS6KA5O75582 802 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 DFFBO76075 338 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 PAK4O96013 591 aaPredicted RBP4.59□□□□□ -1.67
SKP1-208ENST00000521216 CSN3P07498 182 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 PTAFRP25105 342 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 KRTAP10-9P60411 292 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 SNRPD1P62314 119 aaKnown RBP4.59□□□□□ -1.67
SKP1-208ENST00000521216 KLC1Q07866 573 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 PPIGQ13427 754 aaKnown RBP eCLIP4.59□□□□□ -1.67
SKP1-208ENST00000521216 HNRNPDQ14103 355 aaKnown RBP4.59□□□□□ -1.67
SKP1-208ENST00000521216 KRT81Q14533 505 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 PSMD6Q15008 389 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 HYAL4Q2M3T9 481 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 SLC35D3Q5M8T2 416 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 LCN1P1Q5VSP4 162 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 ERN2Q76MJ5 926 aaKnown RBP4.59□□□□□ -1.67
SKP1-208ENST00000521216 CCAR2Q8N163 923 aaKnown RBP4.59□□□□□ -1.67
SKP1-208ENST00000521216 NDUFAF2Q8N183 169 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 RYBPQ8N488 228 aaPredicted RBP4.59□□□□□ -1.67
SKP1-208ENST00000521216 NIPA2Q8N8Q9 360 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 BMPERQ8N8U9 685 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 ZMYND12Q9H0C1 365 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 SHARPINQ9H0F6 387 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 CPVLQ9H3G5 476 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 FZD8Q9H461 694 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 TLE6Q9H808 572 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 POLLQ9UGP5 575 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 LIPGQ9Y5X9 500 aa4.59□□□□□ -1.67
SKP1-208ENST00000521216 KIF26BQ2KJY2 2108 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 RECQL5O94762 991 aaPredicted RBP4.58□□□□□ -1.68
SKP1-208ENST00000521216 GSRP00390 522 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 APOHP02749 345 aaPredicted RBP4.58□□□□□ -1.68
SKP1-208ENST00000521216 RAF1P04049 648 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 GPIP06744 558 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 MYL6BP14649 208 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 LHCGRP22888 699 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 CD27P26842 260 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 NONOQ15233 471 aaKnown RBP eCLIP4.58□□□□□ -1.683e-7■■■□□ 16.4
SKP1-208ENST00000521216 ADAM5Q6NVV9 412 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 FAM47EQ6ZV65 393 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 KIRREL3Q8IZU9 778 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 RAB42Q8N4Z0 105 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 ARHGAP45Q92619 1136 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 MAGED4Q96JG8 741 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 LRRC3BQ96PB8 259 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 GBP5Q96PP8 586 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 RAB3IPQ96QF0 476 aaPredicted RBP4.58□□□□□ -1.68
SKP1-208ENST00000521216 RBM4Q9BWF3 364 aaKnown RBP4.58□□□□□ -1.68
SKP1-208ENST00000521216 FAM49AQ9H0Q0 323 aaPredicted RBP4.58□□□□□ -1.68
SKP1-208ENST00000521216 FN3KQ9H479 309 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 DNAJC4Q9NNZ3 241 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 CHST11Q9NPF2 352 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 CHKBQ9Y259 395 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 R4GN57 208 aa4.58□□□□□ -1.68
SKP1-208ENST00000521216 A0A087WW49 117 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 A0A1W2PPK0 400 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 ARHGEF37A1IGU5 675 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 AP2A2O94973 939 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 EPCAMP16422 314 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 NPY4RP50391 375 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 VAMP7P51809 220 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 ITGA9Q13797 1035 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 ZNF273Q14593 569 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 TMEM187Q14656 261 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 NPTX1Q15818 432 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 CEP85LQ5SZL2 805 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 SHQ1Q6PI26 577 aaKnown RBP4.57□□□□□ -1.68
SKP1-208ENST00000521216 BHLHB9Q6PI77 547 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 ENPP7Q6UWV6 458 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 TMEM207Q6UWW9 146 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 FAM219AQ8IW50 185 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 NOA1Q8NC60 698 aaKnown RBP4.57□□□□□ -1.68
SKP1-208ENST00000521216 GPRC5AQ8NFJ5 357 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 HCAR2Q8TDS4 363 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 MRGPRDQ8TDS7 321 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 GMPPAQ96IJ6 420 aaPredicted RBP4.57□□□□□ -1.68
SKP1-208ENST00000521216 RMDN2Q96LZ7 410 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 WDR13Q9H1Z4 485 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 P2RY12Q9H244 342 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 SNX25Q9H3E2 840 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 Q9H8V8 135 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 GSN-AS1Q9NRJ2 163 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 OR6C2Q9NZP2 312 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 EPHA6Q9UF33 1036 aa4.57□□□□□ -1.68
SKP1-208ENST00000521216 C19orf25Q9UFG5 118 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms