RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SLC26A9Q7LBE3 791 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 TMEM173Q86WV6 379 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 LRRC8AQ8IWT6 810 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 FBXO39Q8N4B4 442 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 KLHDC9Q8NEP7 349 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 LRRC8CQ8TDW0 803 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZNF473Q8WTR7 871 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 DAZLQ92904 295 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 PTERQ96BW5 349 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 SPACA9Q96E40 222 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 STAMBPL1Q96FJ0 436 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 SGK494Q96LW2 274 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 DGAT2Q96PD7 388 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLF1Q9BQI6 1058 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 BTBD10Q9BSF8 475 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ABHD6Q9BV23 337 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 UTP14AQ9BVJ6 771 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC106Q9BWC9 280 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 KLHL4Q9C0H6 718 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZCCHC17Q9NP64 241 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 MBNL1Q9NR56 388 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 OLFML3Q9NRN5 406 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANKEF1Q9NU02 776 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 RBM28Q9NW13 759 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 CRNNQ9UBG3 495 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 DDX25Q9UHL0 483 aaKnown RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANAPC2Q9UJX6 822 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ACAD8Q9UKU7 415 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 SPIN1Q9Y657 262 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 RPS6KL1Q9Y6S9 549 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM169AQ9Y6X4 670 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 TTC41PQ6P2S7 1318 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ADCY9O60503 1353 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ADGRL3Q9HAR2 1447 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 PXDNLA1KZ92 1463 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 A0A087WUV0 522 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANKUB1A6NFN9 424 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 XRCC3O43542 346 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SHOX2O60902 331 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 NPHP4O75161 1426 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 BCL10O95999 233 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 IVLP07476 585 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ADRB2P07550 413 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 INHBAP08476 426 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 NR1D1P20393 614 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 CBLP22681 906 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 DCTP40126 519 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC9A3P48764 834 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SCN5AQ14524 2016 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SMC1AQ14683 1233 aaKnown RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 NCAPD2Q15021 1401 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 TOMM20Q15388 145 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SNAPC1Q16533 368 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 TECRLQ5HYJ1 363 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 MDH1BQ5I0G3 518 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 WLSQ5T9L3 541 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 GRTP1Q5TC63 336 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC35E4Q6ICL7 350 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 TEX38Q6PEX7 206 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 FIGLAQ6QHK4 219 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 LRRC31Q6UY01 552 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 PHLPP2Q6ZVD8 1323 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 PLD3Q8IV08 490 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 EFCAB13Q8IY85 973 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 NALCNQ8IZF0 1738 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 CPSF7Q8N684 471 aaKnown RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 OTUD6BQ8N6M0 293 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 TOPAZ1Q8N9V7 1692 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 POGLUT1Q8NBL1 392 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ATL1Q8WXF7 558 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 TM9SF4Q92544 642 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ARSGQ96EG1 525 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ALG14Q96F25 216 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 DOCK7Q96N67 2140 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM210AQ96ND0 272 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ABHD1Q96SE0 405 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 MAP3K5Q99683 1374 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 LMF2Q9BU23 707 aaKnown RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 WNT5BQ9H1J7 359 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 ACKR4Q9NPB9 350 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 EQTNQ9NQ60 294 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 MIS18AQ9NYP9 233 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 COQ3Q9NZJ6 369 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 RHCGQ9UBD6 479 aa3.06□□□□□ -1.92
HMGB1P41-201ENST00000520234 UBR1Q8IWV7 1749 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 USP54Q70EL1 1684 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 NWD1Q149M9 1564 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 ABCC6O95255 1503 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 OVOS2A0A0G2JMS6 1433 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 NEDD4P46934 1319 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 PCDH7O60245 1069 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 IGKV3-20P01619 116 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 NR3C1P04150 777 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 LINGO3P0C6S8 592 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR2T7P0C7T2 308 aa3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 UBTFL1P0CB47 393 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P41-201ENST00000520234 IGHV4-38-2P0DP08 117 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms